DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gbeta5 and Gnb4

DIOPT Version :10

Sequence 1:NP_572452.1 Gene:Gbeta5 / 31744 FlyBaseID:FBgn0030011 Length:358 Species:Drosophila melanogaster
Sequence 2:NP_038559.2 Gene:Gnb4 / 14696 MGIID:104581 Length:340 Species:Mus musculus


Alignment Length:340 Identity:165/340 - (48%)
Similarity:243/340 - (71%) Gaps:3/340 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 KMASLVREAENLKTKLEEERQKLNDVNLSNIAERLEQIAYVNIKPRKVLKGHQAKVLCTDWSPDK 82
            ::..|.:|||.|:.::::.|:..||..|..|...::.:..:.::.|:.|:||.||:....|..|.
Mouse     3 ELEQLRQEAEQLRNQIQDARKACNDATLVQITSNMDSVGRIQMRTRRTLRGHLAKIYAMHWGYDS 67

  Fly    83 RHIISSSQDGRLIIWDAFTTNKEHAVTMPTTWIMACAYAPSGNFVACGGLDNKVTVYPITSDEEM 147
            |.::|:||||:|||||::||||.||:.:.::|:|.||||||||:||||||||..::|.:.:.|..
Mouse    68 RLLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGN 132

  Fly   148 AAKKRTVGTHTSYMSCCIYPNSDQQILTGSGDSTCALWDVESGQLLQSFHGHSGDVMAIDLAPNE 212
            ....|.:..||.|:|||.:.: |.||:|.|||:||||||:|:||...:|.|||||||::.|:|:.
Mouse   133 VRVSRELPGHTGYLSCCRFLD-DGQIITSSGDTTCALWDIETGQQTTTFTGHSGDVMSLSLSPDL 196

  Fly   213 TGNTFVSGSCDRMAFIWDMRSGHVVQSFEGHQSDVNSVKFHPCGDAIATGSDDSSCRLYDMRADR 277
              .|||||:||..:.:||:|.|...|||.||.||:|:|.|.|.|.|.||||||::|||:|:|||:
Mouse   197 --KTFVSGACDASSKLWDIRDGMCRQSFTGHISDINAVSFFPSGYAFATGSDDATCRLFDLRADQ 259

  Fly   278 EVAVFAKESIIFGVNSVDFSVSGRLLFAGYNDYTVNLWDTLKSERVCLLYGHENKVSCVQVSPDG 342
            |:.:::.::||.|:.||.||.|||||.|||:|:..::||.||..|..:|.||:|:|||:.|:.||
Mouse   260 ELLLYSHDNIICGITSVAFSKSGRLLLAGYDDFNCSVWDALKGGRSGVLAGHDNRVSCLGVTDDG 324

  Fly   343 TALSTGSWDYTIRVW 357
            .|::|||||..:|:|
Mouse   325 MAVATGSWDSFLRIW 339

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gbeta5NP_572452.1 WD40 62..358 CDD:238121 155/296 (52%)
WD40 repeat 73..110 CDD:293791 19/36 (53%)
WD40 repeat 116..156 CDD:293791 20/39 (51%)
WD40 repeat 161..197 CDD:293791 19/35 (54%)
WD40 repeat 204..241 CDD:293791 16/36 (44%)
WD40 repeat 247..283 CDD:293791 20/35 (57%)
WD40 repeat 291..327 CDD:293791 18/35 (51%)
WD40 repeat 333..357 CDD:293791 13/23 (57%)
Gnb4NP_038559.2 WD40 48..340 CDD:238121 155/295 (53%)
WD 1 53..92 21/38 (55%)
WD40 repeat 58..95 CDD:293791 19/36 (53%)
WD 2 95..134 20/38 (53%)
WD40 repeat 101..141 CDD:293791 20/39 (51%)
WD 3 141..179 22/38 (58%)
WD40 repeat 146..181 CDD:293791 19/35 (54%)
WD 4 182..221 20/40 (50%)
WD40 repeat 188..223 CDD:293791 16/36 (44%)
WD 5 224..263 24/38 (63%)
WD40 repeat 229..265 CDD:293791 20/35 (57%)
WD 6 268..307 21/38 (55%)
WD40 repeat 273..309 CDD:293791 18/35 (51%)
WD 7 310..339 16/28 (57%)
WD40 repeat 315..339 CDD:293791 13/23 (57%)

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