DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10959 and AT3G60580

DIOPT Version :9

Sequence 1:NP_572451.1 Gene:CG10959 / 31743 FlyBaseID:FBgn0030010 Length:443 Species:Drosophila melanogaster
Sequence 2:NP_191617.1 Gene:AT3G60580 / 825229 AraportID:AT3G60580 Length:288 Species:Arabidopsis thaliana


Alignment Length:346 Identity:65/346 - (18%)
Similarity:113/346 - (32%) Gaps:126/346 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 CLLCDMKHFGFEDFAR----------HIRNVHFDKQGRPLTKTVTGLGRLAREEQEFQGVSAEPL 94
            |.:|      |:.|..          |:.|.|.::| ||...:......::..:.:|...|:..|
plant     6 CRVC------FKSFVNGKALGGHMRSHMSNSHEEEQ-RPSQLSYETESDVSSSDPKFAFTSSVLL 63

  Fly    95 AVDSFKKEYLPNEDVLSEEEDAEQELGLEQDEGNPLRIM-----------VLGGKQSVDEETIDT 148
                        ||..||.|.:...:.|.:......|.:           .||.|...|:|    
plant    64 ------------EDGESESESSRNVINLTRKRSKRTRKLDSFVTKKVKTSQLGYKPESDQE---- 112

  Fly   149 MWQPDHDSSSASVNEGCALEALLGVENPQDYQPDEDGEEHQSVFKKQRQPKDYNCPHCDRRYTTQ 213
               |.|.|:|.:..|......|:.:...: ::.::..:|.....:.:.:.:.||           
plant   113 ---PPHSSASDTTTEEDLAFCLMMLSRDK-WKKNKSNKEVVEEIETEEESEGYN----------- 162

  Fly   214 KYLNTHLKMSHPFPQAFKCVDCKATFDVDRALAQHRRKEHTEFACQLCDKVFKSSRSLLRHVQGH 278
                                      .::||..:.|.|      |:.|.|||||.::|..|...|
plant   163 --------------------------KINRATTKGRYK------CETCGKVFKSYQALGGHRASH 195

  Fly   279 SGARTFKCEHENCGKSFVNQHNLTSHRRVHSEERNYVCELCGYRSRYREALIVHRRTHTGEKPFQ 343
                               :.|..|:.:  :|:|:        .:.|...::|.:|.|      :
plant   196 -------------------KKNRVSNNK--TEQRS--------ETEYDNVVVVAKRIH------E 225

  Fly   344 CQTCARRFASKSLLNEHQAMH 364
            |..|.|.|||...|..|:..|
plant   226 CPICLRVFASGQALGGHKRSH 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10959NP_572451.1 C2H2 Zn finger 232..253 CDD:275368 4/20 (20%)
COG5048 <258..416 CDD:227381 27/107 (25%)
C2H2 Zn finger 258..278 CDD:275368 9/19 (47%)
C2H2 Zn finger 289..308 CDD:275368 2/18 (11%)
C2H2 Zn finger 316..336 CDD:275368 3/19 (16%)
zf-H2C2_2 328..353 CDD:290200 7/24 (29%)
C2H2 Zn finger 344..364 CDD:275368 8/19 (42%)
zf-H2C2_2 357..381 CDD:290200 3/8 (38%)
C2H2 Zn finger 372..392 CDD:275368
C2H2 Zn finger 400..420 CDD:275368
AT3G60580NP_191617.1 zf-C2H2_6 4..28 CDD:290623 5/27 (19%)
zf-C2H2_6 172..197 CDD:290623 12/49 (24%)
zf-C2H2_6 223..246 CDD:290623 9/28 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 59 1.000 Inparanoid score I2552
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.960

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