DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10959 and CG17801

DIOPT Version :9

Sequence 1:NP_572451.1 Gene:CG10959 / 31743 FlyBaseID:FBgn0030010 Length:443 Species:Drosophila melanogaster
Sequence 2:NP_650660.2 Gene:CG17801 / 42144 FlyBaseID:FBgn0038550 Length:381 Species:Drosophila melanogaster


Alignment Length:385 Identity:90/385 - (23%)
Similarity:143/385 - (37%) Gaps:107/385 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   108 DVLSEEEDAEQELGLEQDEGNPLRI------------------------MVLGGKQSVDEETIDT 148
            :||::.:|. ..:.|||:|..|..|                        ..|..:..:||:...|
  Fly    29 EVLAKIKDL-TGIWLEQNERQPRHICPSCLNDLNTSIKLKKRIQRVHNEATLRRESGLDEDLEST 92

  Fly   149 M--WQPDHDSSSASVNEGCALEALLGVENPQDYQPDEDGEE--------HQSVFKKQRQPKDYNC 203
            :  .:|:.|||.....|.         .:.::|..|:..||        |:....:...|.|...
  Fly    93 VSDIEPEGDSSDLESEES---------YDSENYPFDKKAEESDIDLNLAHEDRRNEPHNPYDSET 148

  Fly   204 P----HCDRRYTTQKYLN---------------------THLKMSHPFPQAFKCVDCKATFDVDR 243
            |    |.:....|..:.|                     |.|::...:| :.|.|...|....|.
  Fly   149 PLIFKHKNPLIETPSFANENLPNKVDAKSPKKGNFIQIGTDLRLLTTYP-SIKVVKPLALAPEDV 212

  Fly   244 AL-----AQHRRKEHTEFACQLCDKVFKSSRSLLRHVQGHSGARTFKCEHENCGKSFVNQHNLTS 303
            |.     |:...::.....|..|.:|||:..:|..|:..|:|.:.|.|..  |.|.||.::....
  Fly   213 AAENVPPAKRTARKMQSLVCPKCGRVFKTPYNLKTHMVRHTGEKNFPCTF--CDKRFVTKYLARL 275

  Fly   304 HRRVHSEERNYVCELCGYRSRYREALIVHRRTHTGEKPFQCQTCARRFASKSLLNEHQAM-HSTE 367
            |.||.                           |.||:||:|..|:..|.:.:..:.|:.: |..:
  Fly   276 HERVR---------------------------HMGEQPFECNFCSATFFTSTAKSSHERIRHIRD 313

  Fly   368 KPYKCDKCDSAFSRPKALYHHKHLHLGIKKFKCKICGNAYAQAAGLSAHMR--AHKLQAS 425
            ..|:||:|...|:....|..||.||.|:|.|.|.||...:|:.|.|.:|..  ||:.:||
  Fly   314 LRYQCDQCTKRFNTKTCLNKHKFLHSGLKPFDCVICQINFARKATLRSHFDSVAHQKRAS 373

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10959NP_572451.1 C2H2 Zn finger 232..253 CDD:275368 5/25 (20%)
COG5048 <258..416 CDD:227381 47/158 (30%)
C2H2 Zn finger 258..278 CDD:275368 7/19 (37%)
C2H2 Zn finger 289..308 CDD:275368 6/18 (33%)
C2H2 Zn finger 316..336 CDD:275368 0/19 (0%)
zf-H2C2_2 328..353 CDD:290200 8/24 (33%)
C2H2 Zn finger 344..364 CDD:275368 4/20 (20%)
zf-H2C2_2 357..381 CDD:290200 7/24 (29%)
C2H2 Zn finger 372..392 CDD:275368 7/19 (37%)
C2H2 Zn finger 400..420 CDD:275368 7/21 (33%)
CG17801NP_650660.2 zf-AD 9..74 CDD:285071 9/45 (20%)
zf-C2H2 231..252 CDD:278523 7/20 (35%)
C2H2 Zn finger 232..252 CDD:275368 7/19 (37%)
zf-H2C2_2 244..269 CDD:290200 9/26 (35%)
C2H2 Zn finger 260..281 CDD:275368 8/49 (16%)
C2H2 Zn finger 289..308 CDD:275368 4/18 (22%)
C2H2 Zn finger 318..338 CDD:275368 7/19 (37%)
C2H2 Zn finger 346..362 CDD:275368 6/15 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45439354
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24388
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.030

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