DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10959 and CG17359

DIOPT Version :10

Sequence 1:NP_572451.1 Gene:CG10959 / 31743 FlyBaseID:FBgn0030010 Length:443 Species:Drosophila melanogaster
Sequence 2:NP_648679.1 Gene:CG17359 / 39549 FlyBaseID:FBgn0036396 Length:339 Species:Drosophila melanogaster


Alignment Length:405 Identity:88/405 - (21%)
Similarity:138/405 - (34%) Gaps:116/405 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 CLANV---DYVRLHAQQQLRP-------KCGEIFYEPEANRFQLVCLLCDMKHFGFEDFARHIRN 59
            ||.::   .|...:..|:..|       :|.......|....|.:|:.|          |..:||
  Fly    16 CLLDIYTEPYASSNRVQEQEPVLATMLRECSGCSVHKEDGMPQFICVEC----------AEAVRN 70

  Fly    60 VHFDKQGRPLTKTVTGLGRLAREEQEFQGVSAEPLAVDSFKKEYLPNEDVLSEEEDAEQ--ELGL 122
            .:             .|.|..|:..::            |::..|    ::.|.:|.|.  .:|.
  Fly    71 AY-------------RLRRQCRKSHQY------------FEQLRL----MMKELDDIEYCLNIGD 106

  Fly   123 EQDEGNPLRIMVLGGKQSVDE----ETIDTMWQPDHDSSSASVNEGCALEALLGVENPQDYQPDE 183
            ..:...|:.:|..|......|    |.:...:.|......:|                    |..
  Fly   107 NIEPQMPVSVMEAGKTPETSEPLLVELVQVKYMPPEPKPISS--------------------PLP 151

  Fly   184 DGEEHQSVFKKQRQPKDYNCPHCDRRYTTQKYLNTHLKMSHPFPQAFKCVDCKATFDVDRALAQH 248
            |..||    |..:.......||...:...:.|.:..                  ::..|..|   
  Fly   152 DNNEH----KLAQSYSPAKTPHNKSKRRARSYSDND------------------SWSPDSEL--- 191

  Fly   249 RRKEHTEFACQLCDKVFKSS-RSLLRHVQGHSGARTFKCEHENCGKSFVNQHNLTSHRRVHSEER 312
               ||.:     .||::.:| |...:.|.|     .::|  :.|.:||..:.||..|.|:|:.||
  Fly   192 ---EHED-----DDKIWNASKRGKPKRVPG-----PYRC--KLCTQSFTQKQNLEIHMRIHTGER 241

  Fly   313 NYVCELCGYRSRYREALIVHRRTHTGEKPFQCQTCARRFASKSLLNEHQAMHSTEKPYKCDKCDS 377
            .|.|.||......:..|..|.|.||||:||.|..|.:||.....|..|...|:.|:|:||.||..
  Fly   242 PYKCSLCPRSFAQKGNLQSHTRCHTGERPFGCPNCPKRFRQVGQLQVHTRTHTGEQPFKCSKCQQ 306

  Fly   378 AFSRPKALYHHKHLH 392
            :|.:...|..|...|
  Fly   307 SFKQLNGLQKHMSAH 321

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10959NP_572451.1 C2H2 Zn finger 232..253 CDD:275368 2/20 (10%)
COG5048 <258..416 CDD:227381 47/136 (35%)
C2H2 Zn finger 258..278 CDD:275368 5/20 (25%)
C2H2 Zn finger 289..308 CDD:275368 7/18 (39%)
C2H2 Zn finger 316..336 CDD:275368 6/19 (32%)
C2H2 Zn finger 344..364 CDD:275368 6/19 (32%)
C2H2 Zn finger 372..392 CDD:275368 6/19 (32%)
C2H2 Zn finger 400..420 CDD:275368
CG17359NP_648679.1 zf-AD 6..88 CDD:462262 17/106 (16%)
SFP1 <131..317 CDD:227516 60/245 (24%)
C2H2 Zn finger 217..237 CDD:275368 8/21 (38%)
zf-H2C2_2 229..254 CDD:463886 11/24 (46%)
C2H2 Zn finger 245..265 CDD:275368 6/19 (32%)
C2H2 Zn finger 273..293 CDD:275368 6/19 (32%)
C2H2 Zn finger 301..321 CDD:275368 6/19 (32%)
Blue background indicates that the domain is not in the aligned region.

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