DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10959 and Meics

DIOPT Version :10

Sequence 1:NP_572451.1 Gene:CG10959 / 31743 FlyBaseID:FBgn0030010 Length:443 Species:Drosophila melanogaster
Sequence 2:NP_524062.1 Gene:Meics / 39539 FlyBaseID:FBgn0025874 Length:583 Species:Drosophila melanogaster


Alignment Length:371 Identity:111/371 - (29%)
Similarity:159/371 - (42%) Gaps:48/371 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 VSAEPLAVDSFKKEYLPNEDVLSEEEDAEQ-ELGLEQDEGNPLRIMVLGGKQSVDEETIDTMWQP 152
            ||.:....|:|.:|. .|.:..||.||::| .:|..:|:..|. |...||:|:|           
  Fly   182 VSIQETFEDAFDEEN-DNNNTDSEREDSDQWTVGSTEDQDEPW-IPGGGGRQTV----------- 233

  Fly   153 DHDSSSASVNEGCALEALLGVENPQDYQPDEDGEEHQSVFKKQRQ-PKDYNCPHCDRRYTTQKYL 216
                       |...::||..|....|...:....|.:..|:|.. .|.:.|..|.|.:.|...|
  Fly   234 -----------GGNNQSLLCTECGVSYSTQKALARHVAKHKEQGDTQKPHLCDFCGRGFRTNAQL 287

  Fly   217 NTHLKMSHPFPQAFKCVDCKATFDVDRALAQHRRKEHTE--FACQLCDKVFKSSRSLLRHVQGHS 279
            .|| :..|...:.|||..|...:.....|..|......|  ..|..|||.|.:..:|..|:|.|:
  Fly   288 TTH-RRRHTGERPFKCPLCPKAYTHGPTLKSHMHTHDEEKGHKCPQCDKTFYTRGNLRAHIQRHT 351

  Fly   280 GARTFKCEHENCGKSFVNQHNLTSHRRVHSEERNYVCELCGYRSRYREALIVHRRTHTGEKPFQC 344
            |.|.:||  .:|.::|.....|..|.|:|.|||.:.|||||......:.||.|.|.|.|::.|:|
  Fly   352 GERPYKC--PDCPQTFAKNSGLKLHSRLHKEERPFKCELCGKGFVQNQHLITHLRVHNGDRQFKC 414

  Fly   345 QTCARRFASKSLLNEHQAMHSTEKPYKCDKCDSAFSRPKALYHHKHLHLGIKKFKCKICGNAYAQ 409
            ..|.:.|..||.:.:||..||..||:||::|..|||....|..|..:|.|.|.:||..||..::.
  Fly   415 PDCDKSFFEKSNMMKHQRTHSGIKPFKCEECGQAFSHNHHLKSHLRIHTGEKPYKCDQCGKGFSA 479

  Fly   410 AAGLSAHM-----------------RAHKLQASVNATEGAEAEPIE 438
            ...|..|.                 :|:..|.|:...|.....|.|
  Fly   480 NQSLMKHTLWHVDNNDRPFKCSQCPKAYDTQQSLRGHEKTHKNPDE 525

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10959NP_572451.1 C2H2 Zn finger 232..253 CDD:275368 4/20 (20%)
COG5048 <258..416 CDD:227381 61/157 (39%)
C2H2 Zn finger 258..278 CDD:275368 8/19 (42%)
C2H2 Zn finger 289..308 CDD:275368 5/18 (28%)
C2H2 Zn finger 316..336 CDD:275368 9/19 (47%)
C2H2 Zn finger 344..364 CDD:275368 7/19 (37%)
C2H2 Zn finger 372..392 CDD:275368 7/19 (37%)
C2H2 Zn finger 400..420 CDD:275368 5/36 (14%)
MeicsNP_524062.1 zf-AD 20..95 CDD:462262
C2H2 Zn finger 242..262 CDD:275368 3/19 (16%)
C2H2 Zn finger 274..294 CDD:275368 7/20 (35%)
SFP1 <296..374 CDD:227516 23/79 (29%)
COG5048 <299..486 CDD:227381 68/188 (36%)
C2H2 Zn finger 302..322 CDD:275368 4/19 (21%)
C2H2 Zn finger 330..350 CDD:275368 8/19 (42%)
C2H2 Zn finger 358..378 CDD:275368 6/21 (29%)
C2H2 Zn finger 386..406 CDD:275368 9/19 (47%)
COG5048 <395..583 CDD:227381 41/131 (31%)
C2H2 Zn finger 414..434 CDD:275368 7/19 (37%)
C2H2 Zn finger 442..462 CDD:275368 7/19 (37%)
C2H2 Zn finger 470..486 CDD:275368 4/15 (27%)
C2H2 Zn finger 500..520 CDD:275368 4/19 (21%)
C2H2 Zn finger 532..552 CDD:275370
C2H2 Zn finger 559..579 CDD:275370
Blue background indicates that the domain is not in the aligned region.

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