DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10959 and CG4282

DIOPT Version :10

Sequence 1:NP_572451.1 Gene:CG10959 / 31743 FlyBaseID:FBgn0030010 Length:443 Species:Drosophila melanogaster
Sequence 2:NP_611118.3 Gene:CG4282 / 36825 FlyBaseID:FBgn0034114 Length:652 Species:Drosophila melanogaster


Alignment Length:544 Identity:111/544 - (20%)
Similarity:181/544 - (33%) Gaps:200/544 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 PLTKTVTG---LGRLAREEQEFQGVSAEP------------LAVDSFKKEYLPNEDVLSEEEDAE 117
            |||:..|.   :.:||.:|:|  ||: ||            :.::..:.:.||..::|  |..|.
  Fly    91 PLTQETTSFPEIIKLATQEEE--GVT-EPQELGGRNFFYPEIKIEEHELDTLPRIEIL--ERSAN 150

  Fly   118 QELGLEQDEGNPLRI---MVLGGKQSVD--------EET-------------------------- 145
            .:...:|.||...|:   :......|||        |||                          
  Fly   151 TQENQDQLEGAARRLRKRLKAEDGSSVDKDKDEDGVEETAEPAPPKKRRGRPRKSDAAVAPPQKP 215

  Fly   146 ----------------IDTMWQPDHD----SSSASVNEGCALEALLGVENPQDYQPDEDGEEHQS 190
                            :|....||..    |.::|.::|    ...|.::..|::.| :|::..:
  Fly   216 KEDIQLDLKAEELDEFVDEETDPDFSCLVPSDNSSEDDG----GSDGFDSDSDFELD-NGKQEFA 275

  Fly   191 V-----------FKKQRQP---------------------------------------------- 198
            |           :||:.:|                                              
  Fly   276 VLPKRTVVRPKKYKKRTKPAEPKVRMSRELLEQRKKQQEEYDVIIAKFFTSVLPCAICNLLVHNF 340

  Fly   199 ----KDYNCPH---------CDRRYTTQKYLNTHLKMSHPFPQAFKCVDCKATFDVDRALAQHRR 250
                :.:...|         |.|::|.:|.|..|: :.|..|..|||..|:.:|...|.|..| :
  Fly   341 TEMQRHHRLTHQVDPGYMMCCGRKFTQRKVLAEHV-LVHWNPDHFKCSVCEKSFQNSRHLESH-Q 403

  Fly   251 KEHTE------FACQLCDKVFKSSRSLLRH-VQGHSGARTFKCEHENCGKSFVNQHNLTSH-RRV 307
            :.|.:      |:|.||.|.|.|..::..| :..|.....||.....|.|.|:.:..|.:| ..:
  Fly   404 QVHMDPAVKLTFSCDLCSKTFLSKTAIDYHKLNKHVPKSEFKFTCSECNKKFLTERKLKNHMSSM 468

  Fly   308 HSEERNYVCELCGYRSRYREALIVHRRTHTGEKP------FQCQTCARRFASKSLLNEHQAM--- 363
            |..|...:|:.||.:.|.:..|..|:.....:||      .|||.|.......:.|.:|...   
  Fly   469 HDPESTIICDKCGKQMRTKIILKKHQELMHSDKPRPEPELQQCQICGAWLKGMTGLKQHMKSIHV 533

  Fly   364 ----------------------------HSTEKPYKCDKCDSAFSRPKALYHHKHLHLGIKKFKC 400
                                        |..|:.:||..|:.||.||:.|..|...|.|...:.|
  Fly   534 ESAGEHRCHICAKVSPNARALRRHIYHNHECERKFKCTMCEKAFKRPQELKEHTSTHTGEVLYTC 598

  Fly   401 KICGNAYAQAAGLSAH-MRAHKLQ 423
            ..|...:..:|.:..| .|.|:.|
  Fly   599 PNCPMTFFCSANMYKHRQRLHRAQ 622

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10959NP_572451.1 C2H2 Zn finger 232..253 CDD:275368 6/20 (30%)
COG5048 <258..416 CDD:227381 47/196 (24%)
C2H2 Zn finger 258..278 CDD:275368 7/20 (35%)
C2H2 Zn finger 289..308 CDD:275368 5/19 (26%)
C2H2 Zn finger 316..336 CDD:275368 6/19 (32%)
C2H2 Zn finger 344..364 CDD:275368 5/50 (10%)
C2H2 Zn finger 372..392 CDD:275368 8/19 (42%)
C2H2 Zn finger 400..420 CDD:275368 5/20 (25%)
CG4282NP_611118.3 zf-AD 7..82 CDD:462262
PLN03237 <81..239 CDD:215641 28/152 (18%)
C2H2 Zn finger 330..351 CDD:275368 0/20 (0%)
C2H2 Zn finger 360..378 CDD:275368 6/18 (33%)
LIM 361..>400 CDD:413332 14/39 (36%)
C2H2 Zn finger 386..406 CDD:275368 6/20 (30%)
C2H2 Zn finger 417..438 CDD:275368 7/20 (35%)
C2H2 Zn finger 448..465 CDD:275368 4/16 (25%)
C2H2 Zn finger 477..498 CDD:275368 6/20 (30%)
C2H2 Zn finger 511..532 CDD:275368 5/20 (25%)
C2H2 Zn finger 541..562 CDD:275368 0/20 (0%)
C2H2 Zn finger 570..590 CDD:275368 8/19 (42%)
C2H2 Zn finger 598..619 CDD:275368 5/20 (25%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.