DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10959 and prg

DIOPT Version :10

Sequence 1:NP_572451.1 Gene:CG10959 / 31743 FlyBaseID:FBgn0030010 Length:443 Species:Drosophila melanogaster
Sequence 2:NP_609232.2 Gene:prg / 34177 FlyBaseID:FBgn0285971 Length:558 Species:Drosophila melanogaster


Alignment Length:418 Identity:101/418 - (24%)
Similarity:164/418 - (39%) Gaps:97/418 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 EQEFQGVSAEPLAVDSFKKEYLPNEDVLSEEEDAEQELGLEQDEGN-------PLRI--MVLGGK 138
            |:||      .|..|...:.|  ::|...||||.::|   ::::|.       ||.:  ..:..:
  Fly   137 EEEF------ALGSDGEYENY--DDDDEEEEEDYDEE---DEEDGQNGEDVDMPLGMDAAQMAAQ 190

  Fly   139 QSVDEETIDTMWQPDHDSSSASVNEGCALEALLGVENPQDYQPDEDGEEHQSVFKKQRQPKDYNC 203
            |||......|..:|    ..|.:.:.|.    ||...|.:.|      ||:........|  |.|
  Fly   191 QSVANNANTTEARP----KRAFLCQYCD----LGFTLPAECQ------EHELAAHDPNAP--YCC 239

  Fly   204 PHCDRRYTTQKYLNTHLKMSHPFPQAFKCVDCKATFDVDRALAQHRRKEHT-------EFACQLC 261
            ..|:.:..|:..|.:|:|..|...:.:.|..|:..|     :.:...|:||       .|.|.:|
  Fly   240 NFCNIKLVTRPALISHIKTLHDPDRPYVCAHCRKGF-----VRRSDLKKHTIVHTGVRPFTCNVC 299

  Fly   262 DKVFKSSRSLLRHVQGHSGARTFKCEHENCGKSFVNQHNLTSHRRVHSEERNYVCELCGYRSRYR 326
            .|.|..:.:|.:|::.|||.:.|.|  :.|.:||.....:..|.|.|.|.:.:.|..|.|....|
  Fly   300 SKSFSRNTNLTKHMRIHSGVKPFVC--QQCPRSFQTAVEMMRHTRSHGEVKAFQCGRCPYSFSRR 362

  Fly   327 EALIVHRRTHT------------------------------------GEKPFQCQTCARRFASKS 355
            :.||.|::.||                                    ..:.:.|..|.|.|..:.
  Fly   363 DKLIAHQQVHTRRDMEQQQQMGLIPPMEGDLQQQALQAKQKAAAQTKNSRYYHCDVCDRTFQRER 427

  Fly   356 LLNEHQAMHSTEKPYKCDKCDSAFSRPKALYHHKHLHLGIKKFKCKICGNAYAQAAGLSAHMRAH 420
            .|..|||:| .:..:.|..|:..|:|.:.|..|: |......|.|.||..::.....|..|::.|
  Fly   428 DLQRHQALH-MDSLFACKTCNQGFNRREQLQRHE-LEAHGPSFTCGICCISFLHQIELENHLKVH 490

  Fly   421 KLQ---------ASVNATEGAEAEPIEM 439
            :||         |::...:.||..|:.|
  Fly   491 QLQHKMAQRAQEAAILPLKMAEKAPVAM 518

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10959NP_572451.1 C2H2 Zn finger 232..253 CDD:275368 4/20 (20%)
COG5048 <258..416 CDD:227381 48/193 (25%)
C2H2 Zn finger 258..278 CDD:275368 6/19 (32%)
C2H2 Zn finger 289..308 CDD:275368 5/18 (28%)
C2H2 Zn finger 316..336 CDD:275368 7/19 (37%)
C2H2 Zn finger 344..364 CDD:275368 8/19 (42%)
C2H2 Zn finger 372..392 CDD:275368 6/19 (32%)
C2H2 Zn finger 400..420 CDD:275368 5/19 (26%)
prgNP_609232.2 zf-AD 16..94 CDD:462262
COG5048 <212..340 CDD:227381 37/146 (25%)
C2H2 Zn finger 239..260 CDD:275368 6/20 (30%)
C2H2 Zn finger 268..288 CDD:275368 6/24 (25%)
C2H2 Zn finger 296..316 CDD:275368 6/19 (32%)
C2H2 Zn finger 324..344 CDD:275368 6/21 (29%)
C2H2 Zn finger 352..372 CDD:275368 7/19 (37%)
C2H2 Zn finger 416..436 CDD:275368 8/19 (42%)
C2H2 Zn finger 443..464 CDD:275368 7/21 (33%)
C2H2 Zn finger 470..490 CDD:275368 5/19 (26%)
Blue background indicates that the domain is not in the aligned region.

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