DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10959 and prg

DIOPT Version :9

Sequence 1:NP_572451.1 Gene:CG10959 / 31743 FlyBaseID:FBgn0030010 Length:443 Species:Drosophila melanogaster
Sequence 2:NP_001260253.1 Gene:prg / 34177 FlyBaseID:FBgn0285971 Length:558 Species:Drosophila melanogaster


Alignment Length:418 Identity:101/418 - (24%)
Similarity:164/418 - (39%) Gaps:97/418 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 EQEFQGVSAEPLAVDSFKKEYLPNEDVLSEEEDAEQELGLEQDEGN-------PLRI--MVLGGK 138
            |:||      .|..|...:.|  ::|...||||.::|   ::::|.       ||.:  ..:..:
  Fly   137 EEEF------ALGSDGEYENY--DDDDEEEEEDYDEE---DEEDGQNGEDVDMPLGMDAAQMAAQ 190

  Fly   139 QSVDEETIDTMWQPDHDSSSASVNEGCALEALLGVENPQDYQPDEDGEEHQSVFKKQRQPKDYNC 203
            |||......|..:|    ..|.:.:.|.    ||...|.:.|      ||:........|  |.|
  Fly   191 QSVANNANTTEARP----KRAFLCQYCD----LGFTLPAECQ------EHELAAHDPNAP--YCC 239

  Fly   204 PHCDRRYTTQKYLNTHLKMSHPFPQAFKCVDCKATFDVDRALAQHRRKEHT-------EFACQLC 261
            ..|:.:..|:..|.:|:|..|...:.:.|..|:..|     :.:...|:||       .|.|.:|
  Fly   240 NFCNIKLVTRPALISHIKTLHDPDRPYVCAHCRKGF-----VRRSDLKKHTIVHTGVRPFTCNVC 299

  Fly   262 DKVFKSSRSLLRHVQGHSGARTFKCEHENCGKSFVNQHNLTSHRRVHSEERNYVCELCGYRSRYR 326
            .|.|..:.:|.:|::.|||.:.|.|  :.|.:||.....:..|.|.|.|.:.:.|..|.|....|
  Fly   300 SKSFSRNTNLTKHMRIHSGVKPFVC--QQCPRSFQTAVEMMRHTRSHGEVKAFQCGRCPYSFSRR 362

  Fly   327 EALIVHRRTHT------------------------------------GEKPFQCQTCARRFASKS 355
            :.||.|::.||                                    ..:.:.|..|.|.|..:.
  Fly   363 DKLIAHQQVHTRRDMEQQQQMGLIPPMEGDLQQQALQAKQKAAAQTKNSRYYHCDVCDRTFQRER 427

  Fly   356 LLNEHQAMHSTEKPYKCDKCDSAFSRPKALYHHKHLHLGIKKFKCKICGNAYAQAAGLSAHMRAH 420
            .|..|||:| .:..:.|..|:..|:|.:.|..|: |......|.|.||..::.....|..|::.|
  Fly   428 DLQRHQALH-MDSLFACKTCNQGFNRREQLQRHE-LEAHGPSFTCGICCISFLHQIELENHLKVH 490

  Fly   421 KLQ---------ASVNATEGAEAEPIEM 439
            :||         |::...:.||..|:.|
  Fly   491 QLQHKMAQRAQEAAILPLKMAEKAPVAM 518

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10959NP_572451.1 C2H2 Zn finger 232..253 CDD:275368 4/20 (20%)
COG5048 <258..416 CDD:227381 48/193 (25%)
C2H2 Zn finger 258..278 CDD:275368 6/19 (32%)
C2H2 Zn finger 289..308 CDD:275368 5/18 (28%)
C2H2 Zn finger 316..336 CDD:275368 7/19 (37%)
zf-H2C2_2 328..353 CDD:290200 9/60 (15%)
C2H2 Zn finger 344..364 CDD:275368 8/19 (42%)
zf-H2C2_2 357..381 CDD:290200 8/23 (35%)
C2H2 Zn finger 372..392 CDD:275368 6/19 (32%)
C2H2 Zn finger 400..420 CDD:275368 5/19 (26%)
prgNP_001260253.1 zf-AD 16..94 CDD:285071
COG5048 <212..340 CDD:227381 37/146 (25%)
C2H2 Zn finger 239..260 CDD:275368 6/20 (30%)
C2H2 Zn finger 268..288 CDD:275368 6/24 (25%)
zf-H2C2_2 280..305 CDD:290200 8/24 (33%)
zf-C2H2 294..316 CDD:278523 7/21 (33%)
C2H2 Zn finger 296..316 CDD:275368 6/19 (32%)
zf-H2C2_2 308..331 CDD:290200 8/24 (33%)
C2H2 Zn finger 324..344 CDD:275368 6/21 (29%)
C2H2 Zn finger 352..372 CDD:275368 7/19 (37%)
C2H2 Zn finger 416..436 CDD:275368 8/19 (42%)
C2H2 Zn finger 443..464 CDD:275368 7/21 (33%)
C2H2 Zn finger 470..490 CDD:275368 5/19 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45439349
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24388
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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