DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10959 and erm

DIOPT Version :10

Sequence 1:NP_572451.1 Gene:CG10959 / 31743 FlyBaseID:FBgn0030010 Length:443 Species:Drosophila melanogaster
Sequence 2:NP_001259891.2 Gene:erm / 326152 FlyBaseID:FBgn0031375 Length:698 Species:Drosophila melanogaster


Alignment Length:189 Identity:65/189 - (34%)
Similarity:94/189 - (49%) Gaps:11/189 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   256 FACQLCDKVFKSSRSLLRHVQGHSGARTFKCEHENCGKSFVNQHNLTSHRRVHSEERNYVCELCG 320
            |:|..|.|||.:..:|.||:..|:|||.|.|  :.|||.|.....|..|:.:|:.|:.:.|:.||
  Fly   318 FSCLECGKVFNAHYNLTRHMPVHTGARPFVC--KVCGKGFRQASTLCRHKIIHTSEKPHKCQTCG 380

  Fly   321 YRSRYREALIVHRRTHTGEKPFQCQTCARRFASKSLLNEHQAMHSTEKPYKCDKCDSAFSRPKAL 385
            ........|..|.|.|.|.|||.|:.|.:.|..|.....|:..||.||.|||:.|:.||.:...|
  Fly   381 KAFNRSSTLNTHSRIHAGYKPFVCEYCGKGFHQKGNYKNHKLTHSGEKAYKCNICNKAFHQVYNL 445

  Fly   386 YHHKHLHLGIKKFKCKICGNAYAQAAGLSAHMR-AHKLQASVNATEGAEAEPIEMLFTY 443
            ..|.|.|...|.:.|::|...:.:...|..||| .|::        |.:.:.::|..||
  Fly   446 TFHMHTHNDKKPYTCRVCAKGFCRNFDLKKHMRKLHEI--------GGDLDDLDMPPTY 496

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10959NP_572451.1 C2H2 Zn finger 232..253 CDD:275368
COG5048 <258..416 CDD:227381 56/157 (36%)
C2H2 Zn finger 258..278 CDD:275368 8/19 (42%)
C2H2 Zn finger 289..308 CDD:275368 6/18 (33%)
C2H2 Zn finger 316..336 CDD:275368 6/19 (32%)
C2H2 Zn finger 344..364 CDD:275368 5/19 (26%)
C2H2 Zn finger 372..392 CDD:275368 7/19 (37%)
C2H2 Zn finger 400..420 CDD:275368 6/20 (30%)
ermNP_001259891.2 COG5048 <295..461 CDD:227381 54/144 (38%)
C2H2 Zn finger 320..340 CDD:275368 8/19 (42%)
C2H2 Zn finger 348..368 CDD:275368 7/21 (33%)
zf-H2C2_2 363..385 CDD:463886 6/21 (29%)
C2H2 Zn finger 376..396 CDD:275368 6/19 (32%)
C2H2 Zn finger 404..424 CDD:275368 5/19 (26%)
C2H2 Zn finger 432..452 CDD:275368 7/19 (37%)
C2H2 Zn finger 460..478 CDD:275368 4/17 (24%)
Blue background indicates that the domain is not in the aligned region.

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