DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10959 and CG18262

DIOPT Version :10

Sequence 1:NP_572451.1 Gene:CG10959 / 31743 FlyBaseID:FBgn0030010 Length:443 Species:Drosophila melanogaster
Sequence 2:NP_572453.1 Gene:CG18262 / 31745 FlyBaseID:FBgn0030012 Length:469 Species:Drosophila melanogaster


Alignment Length:431 Identity:136/431 - (31%)
Similarity:194/431 - (45%) Gaps:70/431 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 KCGEIFYEPEANRFQLVCLLCDMKHFGFEDFARHIRNVHFDKQGRPLTKTVTGLGRLAREEQEFQ 87
            :|||:.:...|: :::.|||||.: ...:.:..|.|..||......|.........:|::..|.|
  Fly    18 RCGEVLFSAPAS-YEVSCLLCDQR-LPLDGYPEHFRLKHFTNSSSSLCSNELESDPIAQDVVEVQ 80

  Fly    88 GVSA--EPLAVDSFKKEYLPNEDVLSEEEDAEQELGLEQDEGNPLRIMVLGGKQSVDEETIDTM- 149
            |...  |.||     ||..|:    .|||:.|:|.|.::........|    |.::.|...|.: 
  Fly    81 GNEELHEELA-----KEASPD----LEEEEEEKEEGSKRQHYQRAAAM----KNTLVETREDLLD 132

  Fly   150 ----WQPDHDSSSASVNEGCALEALLGVENPQDYQPDEDGEEHQSVFKKQRQPKD--YNCPHCDR 208
                |.....|.....:|                  :|:||......|.....||  :.|..|||
  Fly   133 IELDWTGGEQSEHNETHE------------------EEEGESDDDDTKDSNDTKDMLFQCDQCDR 179

  Fly   209 RYTTQKYLNTHLKMSH----------------------PFPQAFKCVD--CKATFDVDRALAQHR 249
            .|.|::.|.:|.::.|                      | |:.:||.:  |..||..:|.|..||
  Fly   180 AYNTKRSLQSHRRLKHSEANGGSLDKSASERNSKKRKGP-PKVYKCNEEACNQTFRTERDLRGHR 243

  Fly   250 RKEHTEFACQLCDKVFKSSRSLLRHVQGHSGARTFKCEHENCGKSFVNQHNLTSHRRVHSEERNY 314
            .| ||...|.:|.|.|..|.:::||.|.|||.:..||  ..|..:|..|..|:||...|:.....
  Fly   244 WK-HTGIFCDICGKPFTQSGNMMRHRQRHSGIKPHKC--PECDATFYTQKELSSHSICHTGRMPC 305

  Fly   315 VCELCGYRSRYREALIVHRRTHTGEKPFQCQTCARRFASKSLLNEHQAMHSTEKPYKCDKCDSAF 379
            :||:||...|.|..|..|.|.||||:|.:|:.|.:.|.|...||.|...|:..:|:.||.|.|.|
  Fly   306 ICEVCGRPCRDRGVLTAHMRRHTGERPAKCEVCGKAFYSFHDLNVHAVSHTNLRPFVCDVCGSTF 370

  Fly   380 SRPKALYHHKHLHLGIKKFKCKICGNAYAQAAGLSAHMRAH 420
            .|.|||..||.||...:|:.||:||..:||:.||:||||:|
  Fly   371 QRKKALRVHKLLHSEQRKYACKLCGKTFAQSGGLNAHMRSH 411

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10959NP_572451.1 C2H2 Zn finger 232..253 CDD:275368 9/22 (41%)
COG5048 <258..416 CDD:227381 65/157 (41%)
C2H2 Zn finger 258..278 CDD:275368 8/19 (42%)
C2H2 Zn finger 289..308 CDD:275368 6/18 (33%)
C2H2 Zn finger 316..336 CDD:275368 9/19 (47%)
C2H2 Zn finger 344..364 CDD:275368 7/19 (37%)
C2H2 Zn finger 372..392 CDD:275368 11/19 (58%)
C2H2 Zn finger 400..420 CDD:275368 12/19 (63%)
CG18262NP_572453.1 COG5236 <222..>313 CDD:227561 36/93 (39%)
C2H2 Zn finger 224..246 CDD:275368 9/22 (41%)
C2H2 Zn finger 251..271 CDD:275368 8/19 (42%)
zf-H2C2_2 263..288 CDD:463886 10/26 (38%)
C2H2 Zn finger 279..327 CDD:275368 17/49 (35%)
zf-H2C2_2 320..342 CDD:463886 10/21 (48%)
C2H2 Zn finger 335..355 CDD:275368 7/19 (37%)
C2H2 Zn finger 363..383 CDD:275368 11/19 (58%)
zf-C2H2 389..411 CDD:395048 12/21 (57%)
C2H2 Zn finger 391..411 CDD:275368 12/19 (63%)

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