DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10959 and Gzf1

DIOPT Version :9

Sequence 1:NP_572451.1 Gene:CG10959 / 31743 FlyBaseID:FBgn0030010 Length:443 Species:Drosophila melanogaster
Sequence 2:NP_001101258.1 Gene:Gzf1 / 311508 RGDID:1562321 Length:707 Species:Rattus norvegicus


Alignment Length:395 Identity:113/395 - (28%)
Similarity:167/395 - (42%) Gaps:84/395 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 PLTKTVTGLGRLAREEQEFQGVSAEPLAVDSFKKEYLP--NEDVLSEEEDAEQELGLEQDEGNPL 130
            |..|.....||||          .:.:.|:..||:|..  .|...|.||.|:.: ...||     
  Rat   216 PFPKIRRASGRLA----------GKKVFVEIPKKKYTRRLREQQKSAEEAAKND-KCPQD----- 264

  Fly   131 RIMVLGGKQSVDEETIDTMWQPDHDSSSASVNEGCAL-----EALLGVENPQDYQPDEDGEEHQS 190
                    ||.|.|.:        ::..||.:|.|..     |:|..||..::.:..:||||   
  Rat   265 --------QSPDNERV--------EAEPASKSEACPASVEREESLQKVEGEKEEEEGKDGEE--- 310

  Fly   191 VFKKQRQPKDYNCPHCDRRYTTQKYLNTHLKMSHPFPQ--AFKCVDCKATFDVDRALAQHRRKEH 253
                 ::..::.|..||:.:..:|....|:|..|....  .::|..|..||.....|..|:|..|
  Rat   311 -----KKKSNFQCTVCDKAFLYEKSFLKHIKYHHGVATEVVYRCDTCGQTFANRCNLKSHQRHVH 370

  Fly   254 T---EFACQLCDKVFKSSRSLLRHV------------------------------QGHSGARTFK 285
            :   .|.|::|.|.||..:.:.|||                              :.|:|.:.:.
  Rat   371 SSERHFPCEMCAKKFKRKKDVKRHVLQVHEGGGERHRCGQCGKGLSSKTALRLHERTHTGDKPYG 435

  Fly   286 CEHENCGKSFVNQHNLTSHRRVHSEERNYVCELCGYRSRYREALIVHRRTHTGEKPFQCQTCARR 350
            |  ..|...|.....|.:|.|||:.||.:||:.||.|......||.|:|.||||:||.|:||.:.
  Rat   436 C--TKCDAKFSQPSALKTHLRVHTGERPFVCDECGARFTQNHMLIYHKRCHTGERPFMCETCGKS 498

  Fly   351 FASKSLLNEHQAMHSTEKPYKCDKCDSAFSRPKALYHHKHLHLGIKKFKCKICGNAYAQAAGLSA 415
            ||||..|..|..:|:..||:||:.|...|::..:||.|..:|.|.:.:.|..||..:.|...|..
  Rat   499 FASKEYLKHHNRIHTGSKPFKCEVCLRTFAQRNSLYQHIKVHTGERPYCCDQCGKQFTQVNALQR 563

  Fly   416 HMRAH 420
            |.|.|
  Rat   564 HHRIH 568

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10959NP_572451.1 C2H2 Zn finger 232..253 CDD:275368 7/20 (35%)
COG5048 <258..416 CDD:227381 61/187 (33%)
C2H2 Zn finger 258..278 CDD:275368 8/49 (16%)
C2H2 Zn finger 289..308 CDD:275368 5/18 (28%)
C2H2 Zn finger 316..336 CDD:275368 8/19 (42%)
zf-H2C2_2 328..353 CDD:290200 14/24 (58%)
C2H2 Zn finger 344..364 CDD:275368 9/19 (47%)
zf-H2C2_2 357..381 CDD:290200 9/23 (39%)
C2H2 Zn finger 372..392 CDD:275368 6/19 (32%)
C2H2 Zn finger 400..420 CDD:275368 7/19 (37%)
Gzf1NP_001101258.1 BTB 21..125 CDD:279045
BTB 32..125 CDD:197585
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 149..221 2/4 (50%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 243..309 20/87 (23%)
C2H2 Zn finger 318..338 CDD:275370 6/19 (32%)
C2H2 Zn finger 349..370 CDD:275368 7/20 (35%)
C2H2 Zn finger 408..428 CDD:275368 0/19 (0%)
COG5048 <411..539 CDD:227381 46/129 (36%)
C2H2 Zn finger 436..456 CDD:275368 6/21 (29%)
zf-H2C2_2 448..473 CDD:290200 12/24 (50%)
C2H2 Zn finger 464..484 CDD:275368 8/19 (42%)
zf-H2C2_2 476..501 CDD:290200 14/24 (58%)
C2H2 Zn finger 492..512 CDD:275368 9/19 (47%)
zf-H2C2_2 504..529 CDD:290200 9/24 (38%)
C2H2 Zn finger 520..540 CDD:275368 6/19 (32%)
zf-H2C2_2 532..557 CDD:290200 8/24 (33%)
COG5048 544..>601 CDD:227381 8/25 (32%)
C2H2 Zn finger 548..568 CDD:275368 7/19 (37%)
zf-H2C2_2 560..584 CDD:290200 4/9 (44%)
C2H2 Zn finger 576..596 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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