DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10959 and Zfp110

DIOPT Version :9

Sequence 1:NP_572451.1 Gene:CG10959 / 31743 FlyBaseID:FBgn0030010 Length:443 Species:Drosophila melanogaster
Sequence 2:XP_006228173.1 Gene:Zfp110 / 308362 RGDID:1306339 Length:865 Species:Rattus norvegicus


Alignment Length:236 Identity:64/236 - (27%)
Similarity:106/236 - (44%) Gaps:47/236 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   211 TTQK---YLNTHLKMSHPFPQAFKCVDCKATFDVDRALAQHRRKEHTEF--------ACQLCDKV 264
            |::|   |:..|||.|.                      :.:.:|:.:.        .|....:|
  Rat   647 TSEKHVPYIKNHLKTSE----------------------REKGRENNDSIKYGPYIKTCYRGSEV 689

  Fly   265 FK------SSRSLLRHVQG------HSGARTFKCEHENCGKSFVNQHNLTSHRRVHSEERNYVCE 317
            .|      .::::.||.|.      |.|::..:|  ..|||.|.|....:.|:::|:.||.|:|.
  Rat   690 RKLRRANNCTKAISRHAQQIFFIKIHKGSQVCRC--SECGKMFRNSRYFSVHKKIHTGERPYMCM 752

  Fly   318 LCGYRSRYREALIVHRRTHTGEKPFQCQTCARRFASKSLLNEHQAMHSTEKPYKCDKCDSAFSRP 382
            .||.......:|..|.|.|:||:||:|..|.|.|..:|.:::|...|:..|||.|..|..||.:.
  Rat   753 ACGKAFVQSSSLTQHLRIHSGERPFECSECGRTFNDRSAISQHLRTHTGAKPYHCQHCGKAFRQS 817

  Fly   383 KALYHHKHLHLGIKKFKCKICGNAYAQAAGLSAHMRAHKLQ 423
            ..|..|:..|.|.:.:.|..||.|:.|::.|..|.:.|:::
  Rat   818 SHLTRHERTHTGERPYVCSNCGKAFTQSSHLIGHQKTHRIK 858

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10959NP_572451.1 C2H2 Zn finger 232..253 CDD:275368 0/20 (0%)
COG5048 <258..416 CDD:227381 54/169 (32%)
C2H2 Zn finger 258..278 CDD:275368 6/31 (19%)
C2H2 Zn finger 289..308 CDD:275368 6/18 (33%)
C2H2 Zn finger 316..336 CDD:275368 6/19 (32%)
zf-H2C2_2 328..353 CDD:290200 12/24 (50%)
C2H2 Zn finger 344..364 CDD:275368 6/19 (32%)
zf-H2C2_2 357..381 CDD:290200 9/23 (39%)
C2H2 Zn finger 372..392 CDD:275368 6/19 (32%)
C2H2 Zn finger 400..420 CDD:275368 7/19 (37%)
Zfp110XP_006228173.1 KRAB 57..116 CDD:214630
KRAB 57..96 CDD:279668
SCAN 200..328 CDD:128708
SCAN 200..283 CDD:280241
KRAB 321..>361 CDD:214630
KRAB 321..360 CDD:279668
C2H2 Zn finger 696..715 CDD:275370 3/18 (17%)
C2H2 Zn finger 723..743 CDD:275368 7/21 (33%)
zf-H2C2_2 735..760 CDD:290200 8/24 (33%)
COG5048 747..>804 CDD:227381 20/56 (36%)
C2H2 Zn finger 751..771 CDD:275368 6/19 (32%)
zf-H2C2_2 763..787 CDD:290200 11/23 (48%)
zf-C2H2 777..799 CDD:278523 7/21 (33%)
C2H2 Zn finger 779..799 CDD:275368 6/19 (32%)
zf-C2H2 805..827 CDD:278523 7/21 (33%)
C2H2 Zn finger 807..827 CDD:275368 6/19 (32%)
zf-H2C2_2 819..844 CDD:290200 8/24 (33%)
C2H2 Zn finger 835..855 CDD:275368 7/19 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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