DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10959 and Opbp

DIOPT Version :10

Sequence 1:NP_572451.1 Gene:CG10959 / 31743 FlyBaseID:FBgn0030010 Length:443 Species:Drosophila melanogaster
Sequence 2:NP_724479.1 Gene:Opbp / 246618 FlyBaseID:FBgn0050443 Length:562 Species:Drosophila melanogaster


Alignment Length:465 Identity:98/465 - (21%)
Similarity:176/465 - (37%) Gaps:135/465 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 CGEIFYEPEANRFQLVCLLCDMKHFGFEDFARHIRNVHFDKQGRPLTKTVTGLGRLAREEQEFQG 88
            ||.::.:.|:                            :|:...|.....||    |..|.:|  
  Fly    36 CGNVYEDTES----------------------------YDRAHGPQAGCCTG----ASGELDF-- 66

  Fly    89 VSAEPLAVDSFKKEYLPNEDVLSEE-------EDAEQELGLEQDEGNPLRI---------MVLGG 137
              .|.:|.|...:| :..||::..:       |:....:..|:|:..|...         .:...
  Fly    67 --IEEVAEDCISEE-VGEEDIVYADVPLWELVEEVPANVKAEKDQNEPSNSDRYFCYDCHSIFEN 128

  Fly   138 KQSVDEETIDTMWQPDHDSSSASVNEGCALEALLGVENPQDYQPDEDGEEHQSVFKK------QR 196
            :...:|...     |..:|..:|                     .:||:....|.:|      :.
  Fly   129 RNKAEEHIC-----PRAESGGSS---------------------QQDGDAKAPVRRKLASVSART 167

  Fly   197 QPKD----YNCPHCDRRYTTQKYLNTHLKM-SHPFPQA------------------FKCVDCKAT 238
            .|:|    .:|..|:..::::|:|..|::: .:..|::                  |.|..|..:
  Fly   168 GPRDASSVISCGICNTVFSSEKFLKFHMRIHENRAPKSIQDALPIGAHQQYSELDQFYCEICNKS 232

  Fly   239 FDVDRALAQHR---RKEHTEFACQLCDKVFKSSRSLLRHVQGHSGART----------------- 283
            || :..|..|:   ::|.:|..|.:|::.|::..:...|.:.|...|.                 
  Fly   233 FD-ETLLTVHKQMHQQESSEIMCSICNRKFENEVTYQMHQKIHEKPRDSESSRKLAQRTSLDKEK 296

  Fly   284 --FKCEHENCGKSFVNQHNLTSHRRVHSEERNYVCELCGYRSRYREALIVHRRTHTGEKPFQCQT 346
              |.|::  |.:.|........|.|||:.|:.|.||:||...|...:|.:|.||||..:|:.|..
  Fly   297 PGFPCQY--CERVFTRPFEKVKHERVHTGEKPYACEVCGKTFRVSYSLTLHLRTHTNIRPYVCTV 359

  Fly   347 CARRFASKSLLNEHQAMHSTEKPYKCDKCDSAFSRPKALYHHKHLHLGIKKFKCKICGNAYAQAA 411
            |.:||.|..:.:.|..:||:|:.:.||.|...|.....||.||:.|  .|.::|.:|...::...
  Fly   360 CNKRFKSHQVYSHHLRIHSSERQFSCDACPKTFRTSVQLYAHKNTH--TKPYRCAVCNRPFSSMY 422

  Fly   412 GLSAHMRAHK 421
            .:..||:.||
  Fly   423 AVKNHMQTHK 432

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10959NP_572451.1 C2H2 Zn finger 232..253 CDD:275368 6/23 (26%)
COG5048 <258..416 CDD:227381 49/176 (28%)
C2H2 Zn finger 258..278 CDD:275368 4/19 (21%)
C2H2 Zn finger 289..308 CDD:275368 4/18 (22%)
C2H2 Zn finger 316..336 CDD:275368 8/19 (42%)
C2H2 Zn finger 344..364 CDD:275368 6/19 (32%)
C2H2 Zn finger 372..392 CDD:275368 8/19 (42%)
C2H2 Zn finger 400..420 CDD:275368 4/19 (21%)
OpbpNP_724479.1 COG5048 <185..433 CDD:227381 66/253 (26%)
C2H2 Zn finger 254..274 CDD:275368 4/19 (21%)
C2H2 Zn finger 301..321 CDD:275368 5/21 (24%)
SFP1 <323..373 CDD:227516 19/49 (39%)
C2H2 Zn finger 329..349 CDD:275368 8/19 (42%)
C2H2 Zn finger 357..377 CDD:275368 6/19 (32%)
C2H2 Zn finger 385..405 CDD:275368 8/19 (42%)
C2H2 Zn finger 411..431 CDD:275368 4/19 (21%)

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