DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10959 and Zbtb17

DIOPT Version :9

Sequence 1:NP_572451.1 Gene:CG10959 / 31743 FlyBaseID:FBgn0030010 Length:443 Species:Drosophila melanogaster
Sequence 2:NP_001365755.1 Gene:Zbtb17 / 22642 MGIID:107410 Length:819 Species:Mus musculus


Alignment Length:436 Identity:114/436 - (26%)
Similarity:171/436 - (39%) Gaps:115/436 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 TGLGRLAREEQEFQGVSA----------EPLA--------------VDSFKKEYLPNE------- 107
            ||.||..:||:..|..||          .|||              .:..:|...|.|       
Mouse   159 TGPGRELKEERGGQAESASSGPVPAMEESPLASGQSPNPASRPSSGAEQTEKADAPREPPPVELK 223

  Fly   108 ------------DVLSEEEDAEQELGLE---------QDEGNPLRIMVLGGKQSVDEE--TIDTM 149
                        :.||  |.:|||:.:|         ::||        .|..:|.||  .:|..
Mouse   224 PDPTSSMAAAEAEALS--ESSEQEMEVEPASKGEDGQEEEG--------AGPATVKEEGMHLDNG 278

  Fly   150 WQPDHDSSSASVNEGCALEALLGVENPQ----DYQPDEDGEEHQSVFKKQRQPKDYNCPHCDRRY 210
            ..|:.:..||..:.|    ..||:|...    .|....:.:.:.|:..|        |..|.:.:
Mouse   279 EPPEENEESAGTDSG----QELGMEGQNLRSGTYGDRTESKAYGSIIHK--------CEDCGKEF 331

  Fly   211 TTQKYLNTHLKMSHPFPQAFKCVDCKATFDVDRALAQHRRKEHT---EFACQLCDKVFKSSRSLL 272
            |.......|::: |...:.|.|.:|...|. |.|..:...|.|:   .:.|:.|.|.::....|.
Mouse   332 THTGNFKRHIRI-HTGEKPFSCRECSKAFS-DPAACKAHEKTHSPLKPYGCEECGKSYRLISLLN 394

  Fly   273 RHVQGHSGARTFKCEHENCGKSFVNQHNLTSHRRVHSEERNYVCELCG-------YRSRYREA-- 328
            .|.:.|||...::|  .:|||.|....||..|:.|||.::.|.|:.||       .:.|:.|.  
Mouse   395 LHKKRHSGEARYRC--GDCGKLFTTSGNLKRHQLVHSGQKPYQCDYCGRSFSDPTSKMRHLETHD 457

  Fly   329 -------------------LIVHRRTHTGEKPFQCQTCARRFASKSLLNEHQAMHSTEKPYKCDK 374
                               |..|.:.|..:.|.:|:.|.::|.:...|..|..:||.||||.|..
Mouse   458 TDKEHKCPHCDKKFNQVGNLKAHLKIHIADGPLKCRECGKQFTTSGNLKRHLRIHSGEKPYVCTH 522

  Fly   375 CDSAFSRPKALYHHKHLHLGIKKFKCKICGNAYAQAAGLSAHMRAH 420
            |...|:.|.||..|..:|.|.|..:|.|||.|:.||:.|.||:|.|
Mouse   523 CQRQFADPGALQRHVRIHTGEKPCQCVICGKAFTQASSLIAHVRQH 568

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10959NP_572451.1 C2H2 Zn finger 232..253 CDD:275368 6/20 (30%)
COG5048 <258..416 CDD:227381 58/185 (31%)
C2H2 Zn finger 258..278 CDD:275368 5/19 (26%)
C2H2 Zn finger 289..308 CDD:275368 7/18 (39%)
C2H2 Zn finger 316..336 CDD:275368 7/47 (15%)
zf-H2C2_2 328..353 CDD:290200 7/45 (16%)
C2H2 Zn finger 344..364 CDD:275368 5/19 (26%)
zf-H2C2_2 357..381 CDD:290200 11/23 (48%)
C2H2 Zn finger 372..392 CDD:275368 7/19 (37%)
C2H2 Zn finger 400..420 CDD:275368 11/19 (58%)
Zbtb17NP_001365755.1 BTB_POZ_ZBTB17_MIZ1 2..113 CDD:349515
PRK07003 <115..>266 CDD:235906 25/116 (22%)
COG5048 322..653 CDD:227381 76/259 (29%)
C2H2 Zn finger 324..344 CDD:275368 4/20 (20%)
C2H2 Zn finger 352..372 CDD:275368 6/20 (30%)
C2H2 Zn finger 380..400 CDD:275368 5/19 (26%)
C2H2 Zn finger 408..428 CDD:275368 8/21 (38%)
C2H2 Zn finger 436..456 CDD:275368 5/19 (26%)
C2H2 Zn finger 464..484 CDD:275368 2/19 (11%)
C2H2 Zn finger 492..512 CDD:275368 5/19 (26%)
C2H2 Zn finger 520..540 CDD:275368 7/19 (37%)
C2H2 Zn finger 548..568 CDD:275368 11/19 (58%)
C2H2 Zn finger 576..596 CDD:275368
C2H2 Zn finger 604..624 CDD:275368
C2H2 Zn finger 632..651 CDD:275370
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

Return to query results.
Submit another query.