DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG10959 and M03D4.4

DIOPT Version :9

Sequence 1:	NP_572451.1	Gene:	CG10959 / 31743	FlyBaseID:	FBgn0030010	Length:	443	Species:	Drosophila melanogaster
Sequence 2:	NP_001023313.1	Gene:	M03D4.4 / 177375	WormBaseID:	WBGene00019751	Length:	505	Species:	Caenorhabditis elegans

Alignment Length:	244	Identity:	63/244 - (25%)
Similarity:	94/244 - (38%)	Gaps:	45/244 - (18%)

- Green bases have known domain annotations that are detailed below.

  Fly   230 FKCVDCKATFDVDRALAQHRRKEH--TEFACQLCDKVFKSSRSLL-------------------- 272
            :.|.||...|.....|.:|.|:||  .|...|..|::...|..|.
Worm     5 YLCRDCSGAFHSLDELQRHEREEHETVEQGDQEEDRMEDDSDELAMIKIKIEDSDFLSDTDSSQL 69

  Fly   273 ---------RHVQGHSGARTFKCEHENCGKSFVNQHNLTSHRRVHSEERNYVCELCGYRSRYREA 328
                     :...|..|  .::|  |:|.:.|..:..|.:|.|:||.|:.:.|..||.....|:.
Worm    70 SMNPTTPSEKSSSGEKG--RYEC--EDCHEMFAVKRELATHMRIHSGEQPHSCTQCGKEFGTRQL 130

  Fly   329 LIVHRRTHTGEKPFQCQTCARRFASKSLLNEHQAMHSTEKPYKCDKCDSAFSRPKALYHHKHLHL 393
            |..|...||||:...|..|.:.|..|..|.:|..:||..:|::|.:|...|.....|..|..:|.
Worm   131 LKKHWMWHTGERSHVCPHCNKAFFQKGHLTQHLMIHSGGRPHECPQCHKTFIFKFDLNRHMKIHQ 195

  Fly   394 GIKKFKCKICGNAYAQAAGLSAHMRAHKLQASVNATEGAEAEPIEMLFT 442
            . :.|.|:.||.::.:...|..|....|         |..:.||..|.|
Worm   196 E-RGFSCQQCGRSFLKQVMLDEHHLKCK---------GKPSSPIRSLLT 234

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG10959	NP_572451.1	C2H2 Zn finger	232..253	CDD:275368	7/20 (35%)
		COG5048	<258..416	CDD:227381	46/186 (25%)
		C2H2 Zn finger	258..278	CDD:275368	4/48 (8%)
		C2H2 Zn finger	289..308	CDD:275368	6/18 (33%)
		C2H2 Zn finger	316..336	CDD:275368	6/19 (32%)
		zf-H2C2_2	328..353	CDD:290200	9/24 (38%)
		C2H2 Zn finger	344..364	CDD:275368	6/19 (32%)
		zf-H2C2_2	357..381	CDD:290200	8/23 (35%)
		C2H2 Zn finger	372..392	CDD:275368	5/19 (26%)
		C2H2 Zn finger	400..420	CDD:275368	5/19 (26%)
M03D4.4	NP_001023313.1	C2H2 Zn finger	90..110	CDD:275368	7/21 (33%)
		zf-H2C2_2	102..127	CDD:290200	9/24 (38%)
		C2H2 Zn finger	118..138	CDD:275368	6/19 (32%)
		C2H2 Zn finger	146..166	CDD:275368	6/19 (32%)
		zf-H2C2_2	158..181	CDD:290200	7/22 (32%)
		zf-C2H2	172..194	CDD:278523	5/21 (24%)
		C2H2 Zn finger	174..194	CDD:275368	5/19 (26%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	0	0.000