DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10959 and LOC1270271

DIOPT Version :10

Sequence 1:NP_572451.1 Gene:CG10959 / 31743 FlyBaseID:FBgn0030010 Length:443 Species:Drosophila melanogaster
Sequence 2:XP_061500017.1 Gene:LOC1270271 / 1270271 VectorBaseID:AGAMI1_010165 Length:988 Species:Anopheles gambiae


Alignment Length:260 Identity:65/260 - (25%)
Similarity:98/260 - (37%) Gaps:56/260 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   135 LGGKQSVDEETIDTMWQPDHDS-----------------SSASVNEGCALEALLGVENPQDYQP- 181
            |.|.::.:..|.|.:...|..|                 :|.|...|....|....::|..... 
Mosquito   683 LSGSKTAELYTYDDLISSDGRSKNRKKASKETTPVQAVAASHSSKAGPPASAASKADSPDQSTAG 747

  Fly   182 --DEDGEEHQSVFKKQRQPKDYNCPHCDRRYTTQKYLNTHLKMSH---PFPQAFKCVDCKATFDV 241
              |..||...:..........|.||.|.::|.|...|:.| |.:|   ....|.|||.|...:..
Mosquito   748 DCDSSGESATASNGTSNGKGKYKCPECGKQYATSSNLSRH-KQTHRSLDSQSAKKCVTCGKAYVS 811

  Fly   242 DRALAQHRRKEHTEFACQLCDKVFKSSRSLLRHVQGHSGARTFKCEHENCGKSFVNQHNLTSHRR 306
            ..|||.|........:|.:|.|:|.....|..|::.|:|.:.:.|.|  |||:|.::.||.:|.:
Mosquito   812 MPALAMHLLTHKLSHSCGVCGKLFSRPWLLQGHLRSHTGEKPYGCGH--CGKAFADRSNLRAHMQ 874

  Fly   307 VHSEERNYVCELCGYRSRYREALIVHRRTHTGEKPFQCQTCARRFASKSLLNEH--QAMHSTEKP 369
            .||.::|                            |:|..|.:.||.||.||:|  .|.:..:.|
Mosquito   875 THSTDKN----------------------------FECGRCHKTFALKSYLNKHLESACYKDDDP 911

  Fly   370  369
            Mosquito   912  911

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10959NP_572451.1 C2H2 Zn finger 232..253 CDD:275368 7/20 (35%)
COG5048 <258..416 CDD:227381 32/114 (28%)
C2H2 Zn finger 258..278 CDD:275368 6/19 (32%)
C2H2 Zn finger 289..308 CDD:275368 7/18 (39%)
C2H2 Zn finger 316..336 CDD:275368 0/19 (0%)
C2H2 Zn finger 344..364 CDD:275368 10/21 (48%)
C2H2 Zn finger 372..392 CDD:275368
C2H2 Zn finger 400..420 CDD:275368
LOC1270271XP_061500017.1 None
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.