DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10959 and LOC101734910

DIOPT Version :10

Sequence 1:NP_572451.1 Gene:CG10959 / 31743 FlyBaseID:FBgn0030010 Length:443 Species:Drosophila melanogaster
Sequence 2:XP_017952895.2 Gene:LOC101734910 / 101734910 XenbaseID:XB-GENE-29088143 Length:396 Species:Xenopus tropicalis


Alignment Length:247 Identity:82/247 - (33%)
Similarity:114/247 - (46%) Gaps:12/247 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   181 PDEDGE----EHQSVFKKQRQPKDYNCPHCDRRYTTQKYLNTHLKMSHPFPQAFKCVDCKATFDV 241
            |..||:    ....|..|....|...|..|.:.:|.:...|.|.:: |...:.|.|.:|...|..
 Frog   144 PSIDGKLMARRSDQVGCKSNGDKSITCSECGKSFTRRSSFNVHRRV-HTGEKPFACSECGKCFRK 207

  Fly   242 DRALAQHRRKEHT---EFACQLCDKVFKSSRSLLRHVQGHSGARTFKCEHENCGKSFVNQHNLTS 303
            ...|..|.| .||   .|.|..|.|.|..|..|..|::.|.|.:.:.|  ..|||||..:..|.:
 Frog   208 ASDLHLHNR-IHTGEKPFTCSECGKRFTRSSHLRSHLRTHLGPKPYSC--SECGKSFTQRSALYA 269

  Fly   304 HRRVHSEERNYVCELCGYRSRYREALIVHRRTHTGEKPFQCQTCARRFASKSLLNEHQAMHSTEK 368
            |.:.|:.|:.:.|..||........||||.|||. ||.|.|..|.:||.:::||..|..:|:.||
 Frog   270 HYKSHTGEKLFSCSECGQSFMQLLDLIVHSRTHQ-EKTFSCPECGKRFINRALLRRHHQIHTGEK 333

  Fly   369 PYKCDKCDSAFSRPKALYHHKHLHLGIKKFKCKICGNAYAQAAGLSAHMRAH 420
            |:.|.:|..||:.......|:..|||.|.|.|..||..:.:.:.|..|.|:|
 Frog   334 PFTCLQCGKAFTYRSDRNRHQKCHLGEKPFCCSQCGKRFTRQSDLKRHHRSH 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10959NP_572451.1 C2H2 Zn finger 232..253 CDD:275368 6/20 (30%)
COG5048 <258..416 CDD:227381 57/157 (36%)
C2H2 Zn finger 258..278 CDD:275368 7/19 (37%)
C2H2 Zn finger 289..308 CDD:275368 7/18 (39%)
C2H2 Zn finger 316..336 CDD:275368 8/19 (42%)
C2H2 Zn finger 344..364 CDD:275368 7/19 (37%)
C2H2 Zn finger 372..392 CDD:275368 5/19 (26%)
C2H2 Zn finger 400..420 CDD:275368 6/19 (32%)
LOC101734910XP_017952895.2 C2H2 Zn finger 115..136 CDD:275368
C2H2 Zn finger 170..190 CDD:275368 5/20 (25%)
C2H2 Zn finger 198..218 CDD:275368 6/20 (30%)
COG5048 <222..384 CDD:227381 59/164 (36%)
C2H2 Zn finger 226..246 CDD:275368 7/19 (37%)
C2H2 Zn finger 254..274 CDD:275368 8/21 (38%)
C2H2 Zn finger 282..302 CDD:275368 8/19 (42%)
C2H2 Zn finger 309..329 CDD:275368 7/19 (37%)
C2H2 Zn finger 337..357 CDD:275368 5/19 (26%)
C2H2 Zn finger 365..385 CDD:275368 6/19 (32%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.