DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10959 and znf853

DIOPT Version :10

Sequence 1:NP_572451.1 Gene:CG10959 / 31743 FlyBaseID:FBgn0030010 Length:443 Species:Drosophila melanogaster
Sequence 2:XP_031748869.1 Gene:znf853 / 100487314 XenbaseID:XB-GENE-6031115 Length:604 Species:Xenopus tropicalis


Alignment Length:519 Identity:136/519 - (26%)
Similarity:189/519 - (36%) Gaps:149/519 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 LHA-----QQQLRPKCGEIFYEPEANRFQL----VCLLCD--MKHFGFEDFARHIRNVHFDKQGR 67
            |||     |::...|..|:.    :|..||    |.:.|:  ..:|..|::       .:.|..:
 Frog    80 LHAPGSVIQKENDKKILELI----SNIIQLLTGEVAIRCEDVSIYFSLEEW-------EYIKGNQ 133

  Fly    68 PLTKTVTGLGRLAREEQEFQGVSAEPLAVDSFKKEYLPNEDVLSEEEDAEQELGLEQDEGN-PLR 131
            .|      |.::.:||:|.|.|              .|.:....::.:...:||......| |.:
 Frog   134 AL------LRKIMKEEEEPQQV--------------CPPDGEYEDKREIPADLGGTLCYNNEPSK 178

  Fly   132 IMVLGGKQSVDEE----TIDTMWQP-------DHDSSSASVNEGCALEALLGVENP--------- 176
            |...|....||.|    .|....||       :..:|..|:|.  ..|.:.|.:.|         
 Frog   179 IGAEGADFCVDGELRNPEISPAEQPPPANGIKEEAASDCSINP--LTEQIQGTDTPTPIMGCSLN 241

  Fly   177 ----QDY--------QPDEDGEEHQSV-FKKQRQPKD--------YNCPHCDRRYTTQ------- 213
                :||        :...:||..... ...|.|..|        |||..|.:|..|:       
 Frog   242 NNSAEDYRSVVIKEEESSSEGENQSDCSINSQIQGTDTPTPNTETYNCSECHKRCKTKAGFLKHQ 306

  Fly   214 ------------------KY---LNTHLKMSHPFPQAFKCVDCKATFDVDRALAQHRRKEHT--- 254
                              ||   ||.| |.||...:.|.|.:|...|.....|.:|.| .||   
 Frog   307 KTHTGVKPFVCSVCEKPFKYQSKLNLH-KRSHTGEKPFSCSECGKRFTRHVHLIEHHR-THTGEK 369

  Fly   255 ---------------EF-------------ACQLCDKVFKSSRSLLRHVQGHSGARTFKCEHENC 291
                           :|             .|..|:|.|.|...|:.|...|.|...:.|  ..|
 Frog   370 PYSCSDCGKHFSHSSDFYRHCRIHRLEKLCICSQCNKQFTSHSELIVHQSSHVGRGQYPC--SEC 432

  Fly   292 GKSFVNQHNLTSHRRVHSEERNYVCELCGYRSRYREALIVHRRTHTGEKPFQCQTCARRFASKSL 356
            ||.||:...|..|.||||.||.|.|..||...:|...|.||:|.|||||||.|..|.:.|..::.
 Frog   433 GKHFVSTSQLKIHLRVHSVERPYSCSECGKCFKYSSYLTVHKRIHTGEKPFTCTECGKGFIDRAY 497

  Fly   357 LNEHQAMHSTEKPYKCDKCDSAFSRPKALYHHKHLHLGIKKFKCKICGNAYAQAAGLSAHMRAH 420
            ||.|:.:|:.:||:.|.:|...||....|..|..:|.|.|.|.|..||..:..:..|..|.|.|
 Frog   498 LNSHKKIHTGKKPFTCTECGKCFSEGSRLKFHTRIHTGEKPFSCSECGKCFRNSTSLKFHTRIH 561

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10959NP_572451.1 C2H2 Zn finger 232..253 CDD:275368 6/20 (30%)
COG5048 <258..416 CDD:227381 62/157 (39%)
C2H2 Zn finger 258..278 CDD:275368 7/19 (37%)
C2H2 Zn finger 289..308 CDD:275368 8/18 (44%)
C2H2 Zn finger 316..336 CDD:275368 8/19 (42%)
C2H2 Zn finger 344..364 CDD:275368 6/19 (32%)
C2H2 Zn finger 372..392 CDD:275368 6/19 (32%)
C2H2 Zn finger 400..420 CDD:275368 6/19 (32%)
znf853XP_031748869.1 KRAB_A-box 112..145 CDD:470626 8/45 (18%)
COG5048 <265..502 CDD:227381 71/240 (30%)
C2H2 Zn finger 289..309 CDD:275368 4/19 (21%)
C2H2 Zn finger 317..337 CDD:275368 6/20 (30%)
C2H2 Zn finger 345..365 CDD:275368 6/20 (30%)
C2H2 Zn finger 373..393 CDD:275368 1/19 (5%)
C2H2 Zn finger 401..421 CDD:275368 7/19 (37%)
C2H2 Zn finger 429..449 CDD:275368 9/21 (43%)
C2H2 Zn finger 457..477 CDD:275368 8/19 (42%)
C2H2 Zn finger 485..505 CDD:275368 6/19 (32%)
zf-H2C2_2 497..521 CDD:463886 8/23 (35%)
C2H2 Zn finger 513..533 CDD:275368 6/19 (32%)
zf-H2C2_2 525..550 CDD:463886 9/24 (38%)
C2H2 Zn finger 541..561 CDD:275368 6/19 (32%)
zf-H2C2_2 553..576 CDD:463886 4/9 (44%)
C2H2 Zn finger 569..589 CDD:275368
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.