DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10959 and si:ch211-241b2.4

DIOPT Version :10

Sequence 1:NP_572451.1 Gene:CG10959 / 31743 FlyBaseID:FBgn0030010 Length:443 Species:Drosophila melanogaster
Sequence 2:NP_001373223.1 Gene:si:ch211-241b2.4 / 100150909 ZFINID:ZDB-GENE-081104-191 Length:294 Species:Danio rerio


Alignment Length:296 Identity:90/296 - (30%)
Similarity:140/296 - (47%) Gaps:24/296 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   141 VDEETIDTMWQPDHDSSSASVNEGCALEALLGVEN-PQDY-QPDEDGEEHQSVFKKQRQPKDYNC 203
            ::||  |.|  .|.||......|...|..::.||: |..: ..|...:.|..        .::.|
Zfish    14 LEEE--DDM--SDLDSYGKIKEEQQDLLTIIEVEDTPHQFITGDTSSQTHLR--------DEFPC 66

  Fly   204 PHCDRRYTTQKYLNTHLKMSHPFPQAFKCVDCKATFDVDRALAQHRRKEHTE--FACQLCDKVFK 266
            .||.:.::....||.| |.:|...:.|.||.|..:|.......:|.:....|  |||..|.|.|.
Zfish    67 THCGKSFSCTSNLNRH-KKTHSGERPFTCVQCGKSFARRENFYRHNQSHIGEKSFACMQCGKSFV 130

  Fly   267 SSRSLLRHVQGHSGARTFKCEHENCGKSFVNQHNLTSHRRVHSEERNYVCELCGYRSRYREALIV 331
            ...:|.:|::.|||.|.::|  |.|||:|....:|..|..:|::.:.|.|..|.......:.|..
Zfish   131 FVDALKKHMRCHSGDRPYEC--EQCGKTFTLMSSLKRHMIIHTDLKPYACSQCERSFSRLDCLKK 193

  Fly   332 HRRTHTGEKPFQCQTCARRFASKSLLNEHQAMHSTEKPYKCDKCDSAFSRPKALYHHKHLHLGIK 396
            |::|||..:|..|..|...|:|..:|..|..:|:.||||.|.:|..:|::...|..|:.:|.|.|
Zfish   194 HQKTHTDARPHLCLQCGSAFSSADILKRHHRIHTGEKPYSCSECGKSFTQSGHLMQHERVHTGRK 258

  Fly   397 KFKCKICGNAYAQAAGLSAHMRAHKLQASVNATEGA 432
            .:.|.|||.:::.|..|.||::.|     :..|.||
Zfish   259 PYICSICGRSFSTARNLPAHIKKH-----LTMTTGA 289

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10959NP_572451.1 C2H2 Zn finger 232..253 CDD:275368 5/20 (25%)
COG5048 <258..416 CDD:227381 53/157 (34%)
C2H2 Zn finger 258..278 CDD:275368 6/19 (32%)
C2H2 Zn finger 289..308 CDD:275368 7/18 (39%)
C2H2 Zn finger 316..336 CDD:275368 4/19 (21%)
C2H2 Zn finger 344..364 CDD:275368 6/19 (32%)
C2H2 Zn finger 372..392 CDD:275368 5/19 (26%)
C2H2 Zn finger 400..420 CDD:275368 8/19 (42%)
si:ch211-241b2.4NP_001373223.1 COG5048 <43..272 CDD:227381 72/239 (30%)
C2H2 Zn finger 66..86 CDD:275368 7/20 (35%)
C2H2 Zn finger 94..114 CDD:275368 5/19 (26%)
C2H2 Zn finger 122..142 CDD:275368 6/19 (32%)
C2H2 Zn finger 150..170 CDD:275368 8/21 (38%)
C2H2 Zn finger 178..198 CDD:275368 4/19 (21%)
C2H2 Zn finger 206..226 CDD:275368 6/19 (32%)
C2H2 Zn finger 234..254 CDD:275368 5/19 (26%)
C2H2 Zn finger 262..282 CDD:275368 8/19 (42%)

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