DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10959 and gli3

DIOPT Version :10

Sequence 1:NP_572451.1 Gene:CG10959 / 31743 FlyBaseID:FBgn0030010 Length:443 Species:Drosophila melanogaster
Sequence 2:XP_004915407.1 Gene:gli3 / 100101789 XenbaseID:XB-GENE-484855 Length:1566 Species:Xenopus tropicalis


Alignment Length:270 Identity:70/270 - (25%)
Similarity:118/270 - (43%) Gaps:64/270 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   128 NPLRIMVLGGKQS------VDEETIDTMWQPDHDS-SSASVNEGCALEALLGVENPQDYQPD--- 182
            ||:::.: |..::      ..|..:.:...|.|:. |.....|.......:.:::    |||   
 Frog   404 NPVQVSI-GPSEAAQQNKPTSESAVSSTGDPLHNKRSKVKPEEDLPSPGAVCIQD----QPDGMT 463

  Fly   183 ---EDGEEHQSVFKKQRQPK---DYNCPH---CDRRYTTQKYLNTHLKMSHPFPQAFKCVDCKAT 238
               |:|::.:|    :::|:   :.|| |   |.|.:.||:.|..|:...|              
 Frog   464 LVKEEGDKDES----KQEPEVVYETNC-HWEGCSREFDTQEQLVHHINNDH-------------- 509

  Fly   239 FDVDRALAQHRRKEHTEFACQLCD-----KVFKSSRSLLRHVQGHSGARTFKCEHENCGKSFVNQ 298
                    .|..|:  ||.|:..|     |.||:...|:.|::.|:|.:..||..|.|.|::...
 Frog   510 --------IHGEKK--EFVCRWLDCSREQKPFKAQYMLVVHMRRHTGEKPHKCTFEGCSKAYSRL 564

  Fly   299 HNLTSHRRVHSEERNYVCELCGYRSRYREA--LIVHR-RTHTGEKPFQCQT--CARRFASKSLLN 358
            .||.:|.|.|:.|:.||||..|....:..|  ...|: |||:.|||:.|:.  |.:|:...|.|.
 Frog   565 ENLKTHLRSHTGEKPYVCEHEGCNKAFSNASDRAKHQNRTHSNEKPYVCKIPGCTKRYTDPSSLR 629

  Fly   359 EH-QAMHSTE 367
            :| :.:|..|
 Frog   630 KHVKTVHGPE 639

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10959NP_572451.1 C2H2 Zn finger 232..253 CDD:275368 2/20 (10%)
COG5048 <258..416 CDD:227381 41/121 (34%)
C2H2 Zn finger 258..278 CDD:275368 7/24 (29%)
C2H2 Zn finger 289..308 CDD:275368 7/18 (39%)
C2H2 Zn finger 316..336 CDD:275368 6/22 (27%)
C2H2 Zn finger 344..364 CDD:275368 6/22 (27%)
C2H2 Zn finger 372..392 CDD:275368
C2H2 Zn finger 400..420 CDD:275368
gli3XP_004915407.1 PHA03247 <54..441 CDD:223021 7/37 (19%)
SFP1 <546..636 CDD:227516 31/89 (35%)
C2H2 Zn finger 552..574 CDD:275368 8/21 (38%)
C2H2 Zn finger 582..605 CDD:275368 6/22 (27%)
C2H2 Zn finger 613..634 CDD:275368 6/20 (30%)
Blue background indicates that the domain is not in the aligned region.

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