DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10959 and si:ch211-161m3.6

DIOPT Version :10

Sequence 1:NP_572451.1 Gene:CG10959 / 31743 FlyBaseID:FBgn0030010 Length:443 Species:Drosophila melanogaster
Sequence 2:NP_001314790.1 Gene:si:ch211-161m3.6 / 100005838 ZFINID:ZDB-GENE-161017-36 Length:295 Species:Danio rerio


Alignment Length:247 Identity:82/247 - (33%)
Similarity:112/247 - (45%) Gaps:30/247 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   183 EDGEEHQSVF--KKQRQPKDYNCPHCDRRYTTQKYLNTHLKMSHPFPQAFKCVDCKATFD---VD 242
            ||.|||....  |::.|..|                  .::...||......|....:|.   .|
Zfish    22 EDAEEHTDPLPVKEESQELD------------------EVEEKGPFENYQHFVTGGQSFHRARTD 68

  Fly   243 RALAQHRRKE---HTEFACQLCDKVFKSSRSLLRHVQGHSGARTFKCEHENCGKSFVNQH-NLTS 303
            |..:|.:.:|   .:.|.|..|.|.|....||.||::.|:|.:.:.|  ..||||| ||| ||..
Zfish    69 RTSSQEKVQEIDPISYFICFQCGKGFTQKGSLNRHMRTHTGEKPYSC--PLCGKSF-NQHGNLEV 130

  Fly   304 HRRVHSEERNYVCELCGYRSRYREALIVHRRTHTGEKPFQCQTCARRFASKSLLNEHQAMHSTEK 368
            |..|||.|..:.|:.||.....:..|..|.|.||||.||.||.|...|.:|..|..|..:|:.|:
Zfish   131 HMGVHSGETPFACQQCGKSFSRKGNLRYHMRVHTGECPFTCQQCGISFTAKGSLTRHMRIHTGER 195

  Fly   369 PYKCDKCDSAFSRPKALYHHKHLHLGIKKFKCKICGNAYAQAAGLSAHMRAH 420
            ||.|.:|..:|.:..:|..|...|.|.|.:.|:.||.::.|...|..|:|.|
Zfish   196 PYTCSECGESFEQHGSLKVHMRTHTGEKPYTCQQCGKSFDQHGNLKVHLRIH 247

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10959NP_572451.1 C2H2 Zn finger 232..253 CDD:275368 6/26 (23%)
COG5048 <258..416 CDD:227381 62/158 (39%)
C2H2 Zn finger 258..278 CDD:275368 8/19 (42%)
C2H2 Zn finger 289..308 CDD:275368 11/19 (58%)
C2H2 Zn finger 316..336 CDD:275368 6/19 (32%)
C2H2 Zn finger 344..364 CDD:275368 7/19 (37%)
C2H2 Zn finger 372..392 CDD:275368 5/19 (26%)
C2H2 Zn finger 400..420 CDD:275368 7/19 (37%)
si:ch211-161m3.6NP_001314790.1 COG5048 <65..234 CDD:227381 65/171 (38%)
C2H2 Zn finger 87..107 CDD:275368 8/19 (42%)
C2H2 Zn finger 115..135 CDD:275368 12/22 (55%)
C2H2 Zn finger 143..163 CDD:275368 6/19 (32%)
C2H2 Zn finger 171..191 CDD:275368 7/19 (37%)
C2H2 Zn finger 199..219 CDD:275368 5/19 (26%)
C2H2 Zn finger 227..247 CDD:275368 7/19 (37%)
zf-H2C2_2 239..264 CDD:463886 4/9 (44%)
C2H2 Zn finger 255..271 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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