DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15336 and gzf1

DIOPT Version :10

Sequence 1:NP_572450.4 Gene:CG15336 / 31742 FlyBaseID:FBgn0030009 Length:159 Species:Drosophila melanogaster
Sequence 2:NP_001039101.1 Gene:gzf1 / 733920 XenbaseID:XB-GENE-1020991 Length:697 Species:Xenopus tropicalis


Alignment Length:160 Identity:51/160 - (31%)
Similarity:68/160 - (42%) Gaps:33/160 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 RLMCEFCGYRTRIYWNLQIHRRRHTGEMPFSCQQCQARFPASYQLKSHLERHLDAGER------- 71
            |..|:.||.......:|.:|.|.|||:.||||..|||:|..:..||:||..|  .||:       
 Frog   398 RHFCKLCGKGLSSKTSLSLHERTHTGDKPFSCPHCQAKFSQTSALKTHLRTH--TGEKPFVCDEC 460

  Fly    72 ----RQRH---------------ICTDCNVGFSSSRALYHHRTLHEDGKRFKCSQCDKSFAQAAG 117
                .|.|               :|..|...|:|...|.||..:|...|.|||..|.::|||...
 Frog   461 DARFTQNHMLIYHKRCHTGEKPFMCETCGKSFASKEYLKHHNRIHTGSKPFKCDFCCRTFAQRNS 525

  Fly   118 YAQHKRIHRQR-----NQRATETTDLKDLQ 142
            ..||.::|...     :|...:.|.|..||
 Frog   526 LYQHIKVHTGERPYCCDQCGKQFTQLNALQ 555

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15336NP_572450.4 C2H2 Zn finger 17..37 CDD:275370 6/19 (32%)
C2H2 Zn finger 45..65 CDD:275368 9/19 (47%)
C2H2 Zn finger 77..97 CDD:275368 7/19 (37%)
C2H2 Zn finger 105..125 CDD:275368 7/19 (37%)
gzf1NP_001039101.1 BTB_POZ_ZBTB23_GZF1 6..133 CDD:349520
C2H2 Zn finger 312..333 CDD:275368
SUF4-like 315..>363 CDD:411020
C2H2 Zn finger 315..333 CDD:411020
C2H2 Zn finger 342..363 CDD:411020
C2H2 Zn finger 342..363 CDD:275368
COG5048 <354..585 CDD:227381 51/160 (32%)
C2H2 Zn finger 401..421 CDD:275368 6/19 (32%)
C2H2 Zn finger 429..449 CDD:275368 9/19 (47%)
C2H2 Zn finger 457..477 CDD:275368 2/19 (11%)
C2H2 Zn finger 485..505 CDD:275368 7/19 (37%)
C2H2 Zn finger 513..533 CDD:275368 7/19 (37%)
C2H2 Zn finger 541..561 CDD:275368 5/15 (33%)
C2H2 Zn finger 569..589 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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