DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15336 and ATbp

DIOPT Version :10

Sequence 1:NP_572450.4 Gene:CG15336 / 31742 FlyBaseID:FBgn0030009 Length:159 Species:Drosophila melanogaster
Sequence 2:NP_001104481.2 Gene:ATbp / 5740592 FlyBaseID:FBgn0039946 Length:388 Species:Drosophila melanogaster


Alignment Length:73 Identity:22/73 - (30%)
Similarity:38/73 - (52%) Gaps:13/73 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 AASSDN--RRLMCEF--CGYRTRIYWNLQIHRRRHTGEMPFSCQQCQARFPASYQLKSHLERHLD 67
            |.|||:  |..:|::  ||.:.:....:::||..|:.|..|:|:.|.|.|..|..|.:|      
  Fly   311 AVSSDDGERWYVCDYETCGLKFKYKSRMELHRVVHSKERRFNCELCSASFKQSCNLSTH------ 369

  Fly    68 AGERRQRH 75
               |:::|
  Fly   370 ---RKKKH 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15336NP_572450.4 C2H2 Zn finger 17..37 CDD:275370 5/21 (24%)
C2H2 Zn finger 45..65 CDD:275368 7/19 (37%)
C2H2 Zn finger 77..97 CDD:275368
C2H2 Zn finger 105..125 CDD:275368
ATbpNP_001104481.2 C2H2 Zn finger 323..345 CDD:275368 5/21 (24%)
C2H2 Zn finger 353..371 CDD:275368 7/26 (27%)
Blue background indicates that the domain is not in the aligned region.

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