DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15336 and CG44002

DIOPT Version :10

Sequence 1:NP_572450.4 Gene:CG15336 / 31742 FlyBaseID:FBgn0030009 Length:159 Species:Drosophila melanogaster
Sequence 2:NP_608754.1 Gene:CG44002 / 33535 FlyBaseID:FBgn0264744 Length:345 Species:Drosophila melanogaster


Alignment Length:132 Identity:44/132 - (33%)
Similarity:59/132 - (44%) Gaps:13/132 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SAERPAASSDNRRLMCEFCGYRTRIYWNLQIHRRRHTGEMPFSCQQCQARFPASYQLKSHLERHL 66
            :.|:|.|        ||.|........:::.|.|.||||.||.|..||:.|.....|:.|:..| 
  Fly   223 TGEKPFA--------CEICQKPFADLASVKRHLRTHTGERPFKCLTCQSAFSDGSALRQHIRIH- 278

  Fly    67 DAGERRQRHICTDCNVGFSSSRALYHHRTLHEDGKRFKCSQCDKSFAQAAGYAQH-KRIHRQRNQ 130
             .|||..:  |..|:..|........|...|...||||||||::.|.|..|..:| |..|..:.:
  Fly   279 -TGERPYK--CDMCDKFFRERSDARKHMMSHTAEKRFKCSQCERRFRQPKGLRRHVKLCHTDKVE 340

  Fly   131 RA 132
            .|
  Fly   341 NA 342

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15336NP_572450.4 C2H2 Zn finger 17..37 CDD:275370 5/19 (26%)
C2H2 Zn finger 45..65 CDD:275368 6/19 (32%)
C2H2 Zn finger 77..97 CDD:275368 4/19 (21%)
C2H2 Zn finger 105..125 CDD:275368 9/20 (45%)
CG44002NP_608754.1 zf-AD 4..74 CDD:462262
C2H2 Zn finger 146..166 CDD:275368
COG5048 <162..302 CDD:227381 27/90 (30%)
C2H2 Zn finger 202..222 CDD:275368
C2H2 Zn finger 230..250 CDD:275368 5/19 (26%)
C2H2 Zn finger 258..278 CDD:275368 6/19 (32%)
SUF4-like 282..>342 CDD:411020 20/61 (33%)
C2H2 Zn finger 286..311 CDD:411020 5/24 (21%)
C2H2 Zn finger 286..306 CDD:275368 4/19 (21%)
C2H2 Zn finger 314..335 CDD:411020 9/20 (45%)
C2H2 Zn finger 314..333 CDD:275368 8/18 (44%)
Blue background indicates that the domain is not in the aligned region.

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