DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15336 and F56D1.1

DIOPT Version :9

Sequence 1:NP_572450.4 Gene:CG15336 / 31742 FlyBaseID:FBgn0030009 Length:159 Species:Drosophila melanogaster
Sequence 2:NP_495042.3 Gene:F56D1.1 / 186375 WormBaseID:WBGene00018959 Length:454 Species:Caenorhabditis elegans


Alignment Length:127 Identity:30/127 - (23%)
Similarity:52/127 - (40%) Gaps:29/127 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 RRRHTGEMPFSCQQCQARFPASYQLKSHLE-RHLDAGER---------RQRHIC---------TD 79
            |.|..|:  |||:.|...|.....|:.|:. .|.:..::         ::::.|         |.
 Worm   329 RSRVHGD--FSCEICLKTFTLRDNLRKHVRVYHSENSQKVVKSTGPKHQEQYKCDRKSKDGDETT 391

  Fly    80 CNVGFSSSRALYHHRTLHEDGKRFKCSQCDKSFAQAAGYAQHKRIHRQRNQRATETTDLKDL 141
            |...|.:.:||:.|..:|:..|.:.|..|::.|.....:|.|...:.|        |.:|||
 Worm   392 CGKTFRTEQALHDHFNVHDGIKPYSCHTCNQKFHARDRFAVHLSKYHQ--------TSIKDL 445

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15336NP_572450.4 C2H2 Zn finger 17..37 CDD:275370 1/2 (50%)
zf-H2C2_2 29..52 CDD:290200 7/17 (41%)
C2H2 Zn finger 45..65 CDD:275368 5/20 (25%)
C2H2 Zn finger 77..97 CDD:275368 7/28 (25%)
C2H2 Zn finger 105..125 CDD:275368 5/19 (26%)
F56D1.1NP_495042.3 C2H2 Zn finger 67..87 CDD:275368
C2H2 Zn finger 94..116 CDD:275368
C2H2 Zn finger 338..359 CDD:275368 5/20 (25%)
C2H2 Zn finger 380..409 CDD:275368 7/28 (25%)
C2H2 Zn finger 417..434 CDD:275368 4/16 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S4779
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.950

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