DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15336 and F56D1.1

DIOPT Version :10

Sequence 1:NP_572450.4 Gene:CG15336 / 31742 FlyBaseID:FBgn0030009 Length:159 Species:Drosophila melanogaster
Sequence 2:NP_495042.3 Gene:F56D1.1 / 186375 WormBaseID:WBGene00018959 Length:454 Species:Caenorhabditis elegans


Alignment Length:127 Identity:30/127 - (23%)
Similarity:52/127 - (40%) Gaps:29/127 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 RRRHTGEMPFSCQQCQARFPASYQLKSHLE-RHLDAGER---------RQRHIC---------TD 79
            |.|..|:  |||:.|...|.....|:.|:. .|.:..::         ::::.|         |.
 Worm   329 RSRVHGD--FSCEICLKTFTLRDNLRKHVRVYHSENSQKVVKSTGPKHQEQYKCDRKSKDGDETT 391

  Fly    80 CNVGFSSSRALYHHRTLHEDGKRFKCSQCDKSFAQAAGYAQHKRIHRQRNQRATETTDLKDL 141
            |...|.:.:||:.|..:|:..|.:.|..|::.|.....:|.|...:.|        |.:|||
 Worm   392 CGKTFRTEQALHDHFNVHDGIKPYSCHTCNQKFHARDRFAVHLSKYHQ--------TSIKDL 445

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15336NP_572450.4 C2H2 Zn finger 17..37 CDD:275370 1/2 (50%)
C2H2 Zn finger 45..65 CDD:275368 5/20 (25%)
C2H2 Zn finger 77..97 CDD:275368 7/28 (25%)
C2H2 Zn finger 105..125 CDD:275368 5/19 (26%)
F56D1.1NP_495042.3 C2H2 Zn finger 67..87 CDD:275368
C2H2 Zn finger 94..116 CDD:275368
C2H2 Zn finger 338..359 CDD:275368 5/20 (25%)
C2H2 Zn finger 380..409 CDD:275368 7/28 (25%)
C2H2 Zn finger 417..434 CDD:275368 4/16 (25%)
Blue background indicates that the domain is not in the aligned region.

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