DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG2129 and ZSCAN10

DIOPT Version :9

Sequence 1:NP_572449.1 Gene:CG2129 / 31741 FlyBaseID:FBgn0030008 Length:465 Species:Drosophila melanogaster
Sequence 2:NP_116194.2 Gene:ZSCAN10 / 84891 HGNCID:12997 Length:780 Species:Homo sapiens


Alignment Length:369 Identity:102/369 - (27%)
Similarity:148/369 - (40%) Gaps:95/369 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   175 HSAKIPHSCPHCTKVYQSRKVLERHIMRQHKDTLSPDVDSEDADYEPPKDAPVKSAAQEYKCEHC 239
            ||::....|..|.:.:|.|..|.:|::...:|...|......|:..|..|.         .|.||
Human   426 HSSEPAFLCAECGRGFQRRASLVQHLLAHAQDQKPPCAPESKAEAPPLTDV---------LCSHC 481

  Fly   240 GKIYHGKYSLRQHLK---RDHDNGEEGGSAI---------FTCLECEAQLPRLRLLDEHMV---Q 289
            |:.:..:.||::||:   ||.|.....||..         |.|.:|.....|    .||:|   :
Human   482 GQSFQRRSSLKRHLRIHARDKDRRSSEGSGSRRRDSDRRPFVCSDCGKAFRR----SEHLVAHRR 542

  Fly   290 AHGGA---ACVVCGRRYKTRHELKRHQLKHTSERNVPCPHPGCGKRFF----TIRHMRNHG---- 343
            .|.|.   :|..|||.:....:|..||..||.|:...||.  |||||.    ..||:..||    
Human   543 VHTGERPFSCQACGRSFTQSSQLVSHQRVHTGEKPYACPQ--CGKRFVRRASLARHLLTHGGPRP 605

  Fly   344 ------------------------------------------------KVHTEQKNFVCESCGYS 360
                                                            ::||.:|...|::||:.
Human   606 HHCTQCGKSFGQTQDLARHQRSHTGEKPCRCSECGEGFSQSAHLARHQRIHTGEKPHACDTCGHR 670

  Fly   361 CRNKETLRVHIRSHTGERPFGCQVCDKRFPSHSGLREHMAMHS------TERPHVCSVCGATFSR 419
            .||...|..|.||||||||:.||.|.:.|..::.||.|:|.|:      .|.|..|..||.:|||
Human   671 FRNSSNLARHRRSHTGERPYSCQTCGRSFRRNAHLRRHLATHAEPGQEQAEPPQECVECGKSFSR 735

  Fly   420 QKGLYHHKFLHADTKQFVCKLCGNAYAQAAGLAGHMRKHRNDEL 463
            ...|..|..:|...:.:.|..||.::::.:.|..|:|.|..:.|
Human   736 SCNLLRHLLVHTGARPYSCTQCGRSFSRNSHLLRHLRTHARETL 779

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2129NP_572449.1 C2H2 Zn finger 296..316 CDD:275370 7/19 (37%)
zf-C2H2_8 323..411 CDD:292531 40/149 (27%)
C2H2 Zn finger 327..346 CDD:275368 9/74 (12%)
C2H2 Zn finger 354..374 CDD:275368 8/19 (42%)
zf-H2C2_2 367..389 CDD:290200 13/21 (62%)
C2H2 Zn finger 382..402 CDD:275368 8/19 (42%)
zf-H2C2_2 395..419 CDD:290200 11/29 (38%)
C2H2 Zn finger 410..430 CDD:275368 8/19 (42%)
C2H2 Zn finger 438..458 CDD:275368 6/19 (32%)
ZSCAN10NP_116194.2 SCAN 40..124 CDD:153421
PHA03418 156..>314 CDD:177646
C2H2 Zn finger 349..370 CDD:275368
C2H2 Zn finger 378..398 CDD:275368
zf-H2C2_2 391..415 CDD:290200
COG5048 400..774 CDD:227381 100/362 (28%)
C2H2 Zn finger 406..426 CDD:275368 102/369 (28%)
C2H2 Zn finger 434..454 CDD:275368 6/19 (32%)
C2H2 Zn finger 478..498 CDD:275368 8/19 (42%)
zf-C2H2 522..544 CDD:278523 7/25 (28%)
C2H2 Zn finger 524..544 CDD:275368 6/23 (26%)
zf-H2C2_2 536..561 CDD:290200 8/24 (33%)
C2H2 Zn finger 552..572 CDD:275368 7/19 (37%)
zf-H2C2_2 565..589 CDD:290200 13/25 (52%)
C2H2 Zn finger 580..600 CDD:275368 9/21 (43%)
zf-H2C2_2 592..615 CDD:290200 4/22 (18%)
C2H2 Zn finger 608..628 CDD:275368 0/19 (0%)
zf-H2C2_2 620..645 CDD:290200 0/24 (0%)
C2H2 Zn finger 636..656 CDD:275368 0/19 (0%)
zf-H2C2_2 648..673 CDD:290200 6/24 (25%)
C2H2 Zn finger 664..684 CDD:275368 8/19 (42%)
zf-H2C2_2 676..701 CDD:290200 14/24 (58%)
C2H2 Zn finger 692..712 CDD:275368 8/19 (42%)
C2H2 Zn finger 728..746 CDD:275368 7/17 (41%)
zf-H2C2_2 738..763 CDD:290200 6/24 (25%)
zf-C2H2 752..774 CDD:278523 6/21 (29%)
C2H2 Zn finger 754..774 CDD:275368 6/19 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.