DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2129 and pag-3

DIOPT Version :9

Sequence 1:NP_572449.1 Gene:CG2129 / 31741 FlyBaseID:FBgn0030008 Length:465 Species:Drosophila melanogaster
Sequence 2:NP_510480.1 Gene:pag-3 / 181588 WormBaseID:WBGene00003909 Length:336 Species:Caenorhabditis elegans


Alignment Length:130 Identity:46/130 - (35%)
Similarity:66/130 - (50%) Gaps:0/130 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   329 CGKRFFTIRHMRNHGKVHTEQKNFVCESCGYSCRNKETLRVHIRSHTGERPFGCQVCDKRFPSHS 393
            |.|.|.||..:..|.:||...|.|.|:.||.:.:...||..|:..|:..||:.|:.|.|||...|
 Worm   131 CTKLFSTIAALEQHQQVHVSDKQFECKQCGKTFKRSSTLSTHLLIHSDTRPYPCEYCGKRFHQKS 195

  Fly   394 GLREHMAMHSTERPHVCSVCGATFSRQKGLYHHKFLHADTKQFVCKLCGNAYAQAAGLAGHMRKH 458
            .:::|..:|:.|:||.|:|||..||:...|..|...|...|.|.|.:||..:.:......|...|
 Worm   196 DMKKHTYIHTGEKPHKCTVCGKAFSQSSNLITHTRKHTGFKPFACDVCGRTFQRKVDRRRHRESH 260

  Fly   459  458
             Worm   261  260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2129NP_572449.1 C2H2 Zn finger 296..316 CDD:275370
zf-C2H2_8 323..411 CDD:292531 30/81 (37%)
C2H2 Zn finger 327..346 CDD:275368 6/16 (38%)
C2H2 Zn finger 354..374 CDD:275368 6/19 (32%)
zf-H2C2_2 367..389 CDD:290200 8/21 (38%)
C2H2 Zn finger 382..402 CDD:275368 7/19 (37%)
zf-H2C2_2 395..419 CDD:290200 10/23 (43%)
C2H2 Zn finger 410..430 CDD:275368 8/19 (42%)
C2H2 Zn finger 438..458 CDD:275368 4/19 (21%)
pag-3NP_510480.1 C2H2 Zn finger 128..148 CDD:275368 6/16 (38%)
zf-H2C2_2 140..165 CDD:290200 8/24 (33%)
zf-C2H2 154..176 CDD:278523 7/21 (33%)
C2H2 Zn finger 156..176 CDD:275368 6/19 (32%)
COG5048 164..>233 CDD:227381 25/68 (37%)
zf-H2C2_2 169..193 CDD:290200 10/23 (43%)
C2H2 Zn finger 184..204 CDD:275368 7/19 (37%)
zf-H2C2_2 196..221 CDD:290200 10/24 (42%)
C2H2 Zn finger 212..232 CDD:275368 8/19 (42%)
zf-H2C2_2 224..247 CDD:290200 8/22 (36%)
C2H2 Zn finger 240..260 CDD:275368 4/19 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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