DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG2129 and ztf-29

DIOPT Version :10

Sequence 1:NP_572449.1 Gene:CG2129 / 31741 FlyBaseID:FBgn0030008 Length:465 Species:Drosophila melanogaster
Sequence 2:NP_499490.1 Gene:ztf-29 / 176585 WormBaseID:WBGene00013438 Length:343 Species:Caenorhabditis elegans


Alignment Length:125 Identity:35/125 - (28%)
Similarity:46/125 - (36%) Gaps:36/125 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   303 YKTRHELKRHQLKHTSERNVPCPHPGCGKRFFTIRHMRNHGKVHTEQKNFVCESCGYSCRNKETL 367
            |:...||||..||    ....|.|  |||.|                       |..:..|:..|
 Worm     3 YRPEAELKRPDLK----GEFLCGH--CGKTF-----------------------CHAASLNRHRL 38

  Fly   368 RVHIRSHTGERPFGCQVCDKRFPSHSGLREHMAM-HSTERPHVCSVCGATFSRQKGLYHH 426
            ..|     |:.. .|.|||.:.|.:..:|.||.. |:.:|...|..|..||..:|.|:.|
 Worm    39 NFH-----GDDQ-QCLVCDTKIPHNDTIRRHMQKEHNIQRVFTCGCCNWTFPDKKELHSH 92

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2129NP_572449.1 SFP1 <180..258 CDD:227516
C2H2 Zn finger 296..316 CDD:275370 6/12 (50%)
zf-C2H2_8 323..411 CDD:464935 21/88 (24%)
C2H2 Zn finger 327..346 CDD:275368 4/18 (22%)
C2H2 Zn finger 354..374 CDD:275368 4/19 (21%)
SFP1 <376..461 CDD:227516 18/52 (35%)
C2H2 Zn finger 382..402 CDD:275368 8/20 (40%)
C2H2 Zn finger 410..430 CDD:275368 7/17 (41%)
C2H2 Zn finger 438..458 CDD:275368
ztf-29NP_499490.1 COG5236 <15..>92 CDD:227561 28/111 (25%)
C2H2 Zn finger 20..40 CDD:275368 9/44 (20%)
C2H2 Zn finger 47..68 CDD:275368 8/20 (40%)
C2H2 Zn finger 76..92 CDD:275368 6/15 (40%)
U2AF_lg 112..>191 CDD:273727
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.