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Protein Alignment CG2129 and LOC102554302
DIOPT Version :9
Sequence 1: | NP_572449.1 |
Gene: | CG2129 / 31741 |
FlyBaseID: | FBgn0030008 |
Length: | 465 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_006230434.1 |
Gene: | LOC102554302 / 102554302 |
RGDID: | 7506689 |
Length: | 275 |
Species: | Rattus norvegicus |
Alignment Length: | 78 |
Identity: | 25/78 - (32%) |
Similarity: | 34/78 - (43%) |
Gaps: | 7/78 - (8%) |
- Green bases have known domain annotations that are detailed below.
Fly 345 VHTEQKNFVCESCGYSCRNKETLRVHIRSHTGERPFGCQVCDKRFPSHSGLREHMAMHST----- 404
:...|:..||..||........|..|.|.|:|||||.|..|..||.....::.|..:|.:
Rat 175 IQPSQRRHVCVDCGRRFTYPSLLISHRRMHSGERPFPCPECGVRFKRKFAVKAHQWIHRSCSGGR 239
Fly 405 --ERPHVCSVCGA 415
.||.:.:|.||
Rat 240 RGRRPGIRAVPGA 252
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
CG2129 | NP_572449.1 |
C2H2 Zn finger |
296..316 |
CDD:275370 |
|
zf-C2H2_8 |
323..411 |
CDD:292531 |
22/72 (31%) |
Software error:
Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.
For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message
and the time and date of the error.