DRSC/TRiP Functional Genomics Resources

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Protein Alignment alpha-PheRS and FRS2

DIOPT Version :9

Sequence 1:NP_572448.1 Gene:alpha-PheRS / 31740 FlyBaseID:FBgn0030007 Length:498 Species:Drosophila melanogaster
Sequence 2:NP_116631.1 Gene:FRS2 / 850522 SGDID:S000001872 Length:503 Species:Saccharomyces cerevisiae


Alignment Length:500 Identity:249/500 - (49%)
Similarity:324/500 - (64%) Gaps:23/500 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 LETTDKADTLD-----LAALFAEDHQKIVGSLKSIQAHG--ELVTAETVTHKSLGLTDEGRAVVE 70
            ||...|.|.||     ||.......|.::.:|.|::||.  |....:|||:   .||.||..::.
Yeast     6 LEILKKLDELDEIKSTLATFPQHGSQDVLSALNSLKAHNKLEFSKVDTVTY---DLTKEGAQILN 67

  Fly    71 NGSHEALVYDLVPPEGIAQA--ALMAAGGANAKVGFSKAMSHGWILVDKS----VTPPLVRRKVD 129
            .||:|..:..|:...|..|.  .:...|....|||.::|..:|||..:.|    ::..|....::
Yeast    68 EGSYEIKLVKLIQELGQLQIKDVMSKLGPQVGKVGQARAFKNGWIAKNASNELELSAKLQNTDLN 132

  Fly   130 TITDVVRNQLQQVALGKG-DQLPAKEVADFKKRKLLQETTTKSFVLARGPEFATTLTKLETDLTV 193
            .:||..::.|.|:..... |.:.||.:.|.|||||:.:.....|.:.:||||:|.|||||||||.
Yeast   133 ELTDETQSILAQIKNNSHLDSIDAKILNDLKKRKLIAQGKITDFNVTKGPEFSTDLTKLETDLTS 197

  Fly   194 EMLANGLWDQLKFKAYNFDALGAPPTRGHLHPLLKVRTEFRQIFLEMGFSEMPTNNYVESSFWNF 258
            :|::...:..||||.|||::.|...:.|.||||.|||.||||||..|||:|||:|.|||:.||||
Yeast   198 DMVSTNAYKDLKFKPYNFNSQGVQISSGALHPLNKVREEFRQIFFSMGFTEMPSNQYVETGFWNF 262

  Fly   259 DALYQPQQHPARDAHDTFFVNHPAKSHKFPQD--YLERVKKVHSVGGYGSKGYGYDWKLEEAQKN 321
            ||||.||||||||..|||::..|..: ..|.|  |::.:|.||..|.:||.||.|:||.||.||.
Yeast   263 DALYVPQQHPARDLQDTFYIKDPLTA-DLPDDKTYMDNIKAVHEQGRFGSIGYRYNWKPEECQKL 326

  Fly   322 LLRTHTTAVSARMLYKLANQEGGFKAAKYFSIDKVFRNETLDATHLAEFHQVEGVIADVGLTLGD 386
            :||||:||:|||||:.||...   |..:.||||:|||||.:||||||||||||||:||..:||||
Yeast   327 VLRTHSTAISARMLHDLAKDP---KPTRLFSIDRVFRNEAVDATHLAEFHQVEGVLADYNITLGD 388

  Fly   387 LIGTLYEFFRKLGITQLEFKPAYNPYTEPSMEIFCYHPGLAKWIEVGNSGVFRPEMLLPMGLPEN 451
            ||..:.|||.::|:|.|.|||.||||||||||||.:|.||.||:|:||||:||||||..||||::
Yeast   389 LIKFMEEFFERMGVTGLRFKPTYNPYTEPSMEIFSWHEGLQKWVEIGNSGMFRPEMLESMGLPKD 453

  Fly   452 VNVIAWGLSLERPTMIKYGINNIRDLVGPKVDLKMVEEGPICRLD 496
            :.|:.|||||||||||||.:.|||:|:|.||.|..:|..|..|||
Yeast   454 LRVLGWGLSLERPTMIKYKVQNIRELLGHKVSLDFIETNPAARLD 498

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alpha-PheRSNP_572448.1 PLN02853 4..496 CDD:215458 247/498 (50%)
PheRS_alpha_core 224..483 CDD:238277 166/260 (64%)
FRS2NP_116631.1 PTZ00326 1..486 CDD:240361 243/486 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157344505
Domainoid 1 1.000 356 1.000 Domainoid score I133
eggNOG 1 0.900 - - E1_COG0016
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H3280
Inparanoid 1 1.050 461 1.000 Inparanoid score I237
Isobase 1 0.950 - 0 Normalized mean entropy S460
OMA 1 1.010 - - QHG53816
OrthoFinder 1 1.000 - - FOG0004743
OrthoInspector 1 1.000 - - oto100075
orthoMCL 1 0.900 - - OOG6_100669
Panther 1 1.100 - - LDO PTHR11538
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1437
SonicParanoid 1 1.000 - - X2815
TreeFam 1 0.960 - -
1615.740

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