DRSC/TRiP Functional Genomics Resources

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Protein Alignment alpha-PheRS and PheRS-m

DIOPT Version :9

Sequence 1:NP_572448.1 Gene:alpha-PheRS / 31740 FlyBaseID:FBgn0030007 Length:498 Species:Drosophila melanogaster
Sequence 2:NP_477283.1 Gene:PheRS-m / 36547 FlyBaseID:FBgn0275436 Length:453 Species:Drosophila melanogaster


Alignment Length:346 Identity:77/346 - (22%)
Similarity:119/346 - (34%) Gaps:136/346 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   201 WDQLKFKAYNFDALGAPPTRGHL---HPLLKVRTEFRQIFL-----EMG---FSEMPTNNYVESS 254
            |..:..|..::  :||   ..||   |||..:|......|.     :.|   ||.....|.|.:.
  Fly    48 WTNVTPKILSY--VGA---NKHLQTDHPLSIIRQRIVNYFYGAYRNQRGNPLFSVYDQMNPVVTV 107

  Fly   255 FWNFDALYQPQQHPARDAHDTFFVNHPAKSHKFPQDYLERVKKVHSVGGYGSKGYGYDWKLEEAQ 319
            ..|||.|..|..|.:|...|.:::|                                       |
  Fly   108 QQNFDNLLIPADHVSRQKSDCYYIN---------------------------------------Q 133

  Fly   320 KNLLRTHTTAVSARMLYKLANQEGGFKAAKYFSIDKVFRNETLDATHLAEFHQVE---------- 374
            ::|||.||||....::      .||..  .:..:.:|:|.:.:|:||...|||.:          
  Fly   134 QHLLRAHTTAHQVELI------SGGLD--NFLVVGEVYRRDEIDSTHYPVFHQADAVRLVTKDKL 190

  Fly   375 ---------------GVIAD-----------------------------------VGLTLGDLIG 389
                           |.:||                                   |||| .||.|
  Fly   191 FERNPGLELFEETWSGTLADPKLILPSSKFMDQTKQPCHTLEAVKLMEHEMKHVLVGLT-KDLFG 254

  Fly   390 TLYEFFRKLGITQLEFKPAYNPYTEPSMEIFCYHPGLAKWIEVGNSGVFRPEMLLPMGLPENVNV 454
            ...::         .:...|.|:|:||.|:..|...  .|:||...|:.|.|:|...|:.:::. 
  Fly   255 PRIKY---------RWVDTYFPFTQPSWELEIYFKD--NWLEVLGCGIMRHEILQRSGVHQSIG- 307

  Fly   455 IAWGLSLERPTMIKYGINNIR 475
            .|:|:.|||..|:.:.|.:||
  Fly   308 YAFGVGLERLAMVLFDIPDIR 328

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alpha-PheRSNP_572448.1 PLN02853 4..496 CDD:215458 77/346 (22%)
PheRS_alpha_core 224..483 CDD:238277 71/320 (22%)
PheRS-mNP_477283.1 pheS_mito 29..452 CDD:129561 77/346 (22%)
PheRS_alpha_core 69..334 CDD:238277 71/320 (22%)
FDX-ACB 356..453 CDD:214893
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45460718
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0016
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11538
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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