DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smox and Smad9

DIOPT Version :9

Sequence 1:NP_001285006.1 Gene:Smox / 31738 FlyBaseID:FBgn0025800 Length:486 Species:Drosophila melanogaster
Sequence 2:NP_620227.2 Gene:Smad9 / 85435 RGDID:71004 Length:430 Species:Rattus norvegicus


Alignment Length:493 Identity:253/493 - (51%)
Similarity:306/493 - (62%) Gaps:79/493 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLPFTPQVVKRLLALKKGNEDNSVEGKWSEKAVKNLVKKI-KKNSQLEELERAISTQNCQTRCVT 64
            :..||...|||||..|:|:|    |.||:||||.:||||: ||...::|||||:|.....::|||
  Rat    10 LFSFTSPAVKRLLGWKQGDE----EEKWAEKAVDSLVKKLKKKKGAMDELERALSCPGQPSKCVT 70

  Fly    65 VPRSKPAPAGEHLRKGLPHVIYCRLWRWPDLQSQNELKPLDHCEYAFHLRKEEICINPYHYKKIE 129
            :|||.........|||||||||||:||||||||.:|||||:.||:.|..:::|:|||||||:::|
  Rat    71 IPRSLDGRLQVSHRKGLPHVIYCRVWRWPDLQSHHELKPLECCEFPFGSKQKEVCINPYHYRRVE 135

  Fly   130 LSILVPKSLPTPPDSIVDYPLDNHTHQIPNNTDYN-----AAIIRSASLSPPQYMELGGAGPVSV 189
            ..:|.|.                   .:|.:::||     .|..|||||.....|......|.|.
  Rat   136 TPVLPPV-------------------LVPRHSEYNPQLSLLAKFRSASLHSEPLMPHNATYPDSF 181

  Fly   190 SSSASSTPATAAGGGGGPSSSSSSSSSAASAYQQQQQQLSFGQNMDSQSSVLSVGSSIPNTGTPP 254
            ..|....|                .||....:.|.....|:.|:                     
  Rat   182 QQSLGPAP----------------PSSPGHVFPQSPCPTSYPQS--------------------- 209

  Fly   255 PGYMSEDGDPIDPNDNMNMSRLTPPADAAPVMYHEPAFWCSISYYELNTRVGETFHASQPSITVD 319
            ||..||...|..            .:|..||.|.||..|||::|||||.||||||.||..|:.:|
  Rat   210 PGSPSESDSPYQ------------HSDFRPVCYEEPLHWCSVAYYELNNRVGETFQASSRSVLID 262

  Fly   320 GFTDPSNS-ERFCLGLLSNVNRNEVVEQTRRHIGKGVRLYYIGGEVFAECLSDSSIFVQSPNCNQ 383
            |||||||: .|||||||||||||..:|.|||||||||.|||:||||:|||:|||||||||.|||.
  Rat   263 GFTDPSNNRNRFCLGLLSNVNRNSTIENTRRHIGKGVHLYYVGGEVYAECVSDSSIFVQSRNCNY 327

  Fly   384 RYGWHPATVCKIPPGCNLKIFNNQEFAALLSQSVSQGFEAVYQLTRMCTIRMSFVKGWGAEYRRQ 448
            ::|:|||||||||.||:||:||||.||.||:|||..|||.||:||:||||||||||||||||.||
  Rat   328 QHGFHPATVCKIPSGCSLKVFNNQLFAQLLAQSVHHGFEVVYELTKMCTIRMSFVKGWGAEYHRQ 392

  Fly   449 TVTSTPCWIELHLNGPLQWLDRVLTQMGSPRLPCSSMS 486
            .|||||||||:||:|||||||:||||||||..|.||:|
  Rat   393 DVTSTPCWIEIHLHGPLQWLDKVLTQMGSPHNPISSVS 430

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmoxNP_001285006.1 MH1_R-SMAD 7..130 CDD:199812 68/123 (55%)
MH2_SMAD_2_3 285..475 CDD:199826 145/190 (76%)
Smad9NP_620227.2 MH1_SMAD_1_5_9 13..136 CDD:199814 70/126 (56%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 171..222 15/99 (15%)
MH2 230..430 CDD:412135 152/199 (76%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D274383at33208
OrthoFinder 1 1.000 - - FOG0000630
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X373
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.920

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