DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smox and smad3a

DIOPT Version :10

Sequence 1:NP_511079.1 Gene:Smox / 31738 FlyBaseID:FBgn0025800 Length:486 Species:Drosophila melanogaster
Sequence 2:NP_571646.1 Gene:smad3a / 58092 ZFINID:ZDB-GENE-000509-3 Length:425 Species:Danio rerio


Alignment Length:499 Identity:303/499 - (60%)
Similarity:348/499 - (69%) Gaps:89/499 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLPFTPQVVKRLLALKKGNEDNSVEGKWSEKAVKNLVKKIKKNSQLEELERAISTQNCQTRCVTV 65
            :|||||.:|||||..||| |.|..|.||.|||||:||||:||..||:|||:||:||:..|:|:|:
Zfish     3 ILPFTPPIVKRLLGWKKG-EQNGQEEKWCEKAVKSLVKKLKKTGQLDELEKAITTQDVNTKCITI 66

  Fly    66 PRSKPAPAGEHLRKGLPHVIYCRLWRWPDLQSQNELKPLDHCEYAFHLRKEEICINPYHYKKIEL 130
            |||.........||||||||||||||||||||.:||:.::.||:|||::|:|:|:|||||:::|.
Zfish    67 PRSLDGRLQVSHRKGLPHVIYCRLWRWPDLQSHHELRAIELCEFAFHMKKDEVCVNPYHYQRVET 131

  Fly   131 SILVPKSLPTPPDSIVDY-PLDNHTHQIPNNTDYNAAIIRSASLSPPQYMELGGAGPVSVSSSAS 194
            .:|.|..:|...:...:: |||:::|.||.||.:.|.|       .||                 
Zfish   132 PVLPPVLVPRHTEIPSEFPPLDDYSHSIPENTIFPAGI-------EPQ----------------- 172

  Fly   195 STPATAAGGGGGPSSSSSSSSSAASAYQQQQQQLSFGQNMDSQSSVLSVGSSIPNTGTPPPGYMS 259
                                    |.|                         ||.  ||||||:|
Zfish   173 ------------------------SNY-------------------------IPE--TPPPGYIS 186

  Fly   260 EDGDPIDPNDNMNMSRLTP--------PA----DAAPVMYHEPAFWCSISYYELNTRVGETFHAS 312
            |||:..|...|.:|...:|        ||    |..||.|.||||||||||||||.|||||||||
Zfish   187 EDGETSDHQMNRSMDTGSPNLSPNPVSPAHNNLDLQPVTYCEPAFWCSISYYELNQRVGETFHAS 251

  Fly   313 QPSITVDGFTDPSNSERFCLGLLSNVNRNEVVEQTRRHIGKGVRLYYIGGEVFAECLSDSSIFVQ 377
            |||:|||||||||||||||||||||||||..||.||||||:|||||||||||||||||||:||||
Zfish   252 QPSLTVDGFTDPSNSERFCLGLLSNVNRNAAVELTRRHIGRGVRLYYIGGEVFAECLSDSAIFVQ 316

  Fly   378 SPNCNQRYGWHPATVCKIPPGCNLKIFNNQEFAALLSQSVSQGFEAVYQLTRMCTIRMSFVKGWG 442
            ||||||||||||||||||||||||||||||||||||:|||:||||||||||||||||||||||||
Zfish   317 SPNCNQRYGWHPATVCKIPPGCNLKIFNNQEFAALLAQSVNQGFEAVYQLTRMCTIRMSFVKGWG 381

  Fly   443 AEYRRQTVTSTPCWIELHLNGPLQWLDRVLTQMGSPRLPCSSMS 486
            |||||||||||||||||||||||||||:||||||||.:.|||:|
Zfish   382 AEYRRQTVTSTPCWIELHLNGPLQWLDKVLTQMGSPSIRCSSVS 425

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmoxNP_511079.1 MH1_R-SMAD 7..130 CDD:199812 74/122 (61%)
MH2_SMAD_2_3 285..475 CDD:199826 177/189 (94%)
smad3aNP_571646.1 MH1_SMAD_2_3 7..131 CDD:199815 76/124 (61%)
MH2_SMAD_2_3 224..414 CDD:199826 177/189 (94%)

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