DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smox and Smad9

DIOPT Version :9

Sequence 1:NP_001285006.1 Gene:Smox / 31738 FlyBaseID:FBgn0025800 Length:486 Species:Drosophila melanogaster
Sequence 2:XP_036019060.1 Gene:Smad9 / 55994 MGIID:1859993 Length:456 Species:Mus musculus


Alignment Length:496 Identity:253/496 - (51%)
Similarity:306/496 - (61%) Gaps:82/496 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLPFT---PQVVKRLLALKKGNEDNSVEGKWSEKAVKNLVKKI-KKNSQLEELERAISTQNCQTR 61
            ::|.|   ...|||||..|:|:|    |.||:||||.:||||: ||...::|||||:|.....::
Mouse    33 LVPMTSVDSPAVKRLLGWKQGDE----EEKWAEKAVDSLVKKLKKKKGAMDELERALSCPGQPSK 93

  Fly    62 CVTVPRSKPAPAGEHLRKGLPHVIYCRLWRWPDLQSQNELKPLDHCEYAFHLRKEEICINPYHYK 126
            |||:|||.........|||||||||||:||||||||.:|||||:.||:.|..:::|:|||||||:
Mouse    94 CVTIPRSLDGRLQVSHRKGLPHVIYCRVWRWPDLQSHHELKPLECCEFPFGSKQKEVCINPYHYR 158

  Fly   127 KIELSILVPKSLPTPPDSIVDYPLDNHTHQIPNNTDYN-----AAIIRSASLSPPQYMELGGAGP 186
            ::|..:|.|.                   .:|.:::||     .|..|||||.....|......|
Mouse   159 RVETPVLPPV-------------------LVPRHSEYNPQLSLLAKFRSASLHSEPLMPHNATYP 204

  Fly   187 VSVSSSASSTPATAAGGGGGPSSSSSSSSSAASAYQQQQQQLSFGQNMDSQSSVLSVGSSIPNTG 251
            .|...|....|                .||....:.|                     |..|.:.
Mouse   205 DSFQQSLCPAP----------------PSSPGHVFPQ---------------------SPCPTSY 232

  Fly   252 TPPPGYMSEDGDPIDPNDNMNMSRLTPPADAAPVMYHEPAFWCSISYYELNTRVGETFHASQPSI 316
            ...||..||...|..            .:|..||.|.||..|||::|||||.||||||.||..|:
Mouse   233 PHSPGSPSESDSPYQ------------HSDFRPVCYEEPQHWCSVAYYELNNRVGETFQASSRSV 285

  Fly   317 TVDGFTDPSNS-ERFCLGLLSNVNRNEVVEQTRRHIGKGVRLYYIGGEVFAECLSDSSIFVQSPN 380
            .:||||||||: .|||||||||||||..:|.|||||||||.|||:||||:|||:|||||||||.|
Mouse   286 LIDGFTDPSNNRNRFCLGLLSNVNRNSTIENTRRHIGKGVHLYYVGGEVYAECVSDSSIFVQSRN 350

  Fly   381 CNQRYGWHPATVCKIPPGCNLKIFNNQEFAALLSQSVSQGFEAVYQLTRMCTIRMSFVKGWGAEY 445
            ||.::|:|||||||||.||:||:||||.||.||:|||..|||.||:||:||||||||||||||||
Mouse   351 CNYQHGFHPATVCKIPSGCSLKVFNNQLFAQLLAQSVHHGFEVVYELTKMCTIRMSFVKGWGAEY 415

  Fly   446 RRQTVTSTPCWIELHLNGPLQWLDRVLTQMGSPRLPCSSMS 486
            .||.|||||||||:||:|||||||:||||||||..|.||:|
Mouse   416 HRQDVTSTPCWIEIHLHGPLQWLDKVLTQMGSPHNPISSVS 456

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmoxNP_001285006.1 MH1_R-SMAD 7..130 CDD:199812 68/123 (55%)
MH2_SMAD_2_3 285..475 CDD:199826 145/190 (76%)
Smad9XP_036019060.1 MH1_SMAD_1_5_9 41..162 CDD:199814 68/124 (55%)
MH2 256..456 CDD:412135 152/199 (76%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3701
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000630
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X373
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.810

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