DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smox and smad9

DIOPT Version :10

Sequence 1:NP_511079.1 Gene:Smox / 31738 FlyBaseID:FBgn0025800 Length:486 Species:Drosophila melanogaster
Sequence 2:NP_001315428.1 Gene:smad9 / 445564 ZFINID:ZDB-GENE-031014-1 Length:466 Species:Danio rerio


Alignment Length:504 Identity:274/504 - (54%)
Similarity:331/504 - (65%) Gaps:65/504 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLPFTPQVVKRLLALKKGNEDNSVEGKWSEKAVKNLVKKI-KKNSQLEELERAISTQNCQTRCVT 64
            :..||...|||||..|:|:|    |.||:||||.:||||: ||...:||||:|:|.....::|||
Zfish    10 LFSFTSPAVKRLLGWKQGDE----EEKWAEKAVDSLVKKLKKKKGAMEELEKALSCPGQPSKCVT 70

  Fly    65 VPRSKPAPAGEHLRKGLPHVIYCRLWRWPDLQSQNELKPLDHCEYAFHLRKEEICINPYHYKKIE 129
            :|||.........|||||||||||:||||||||.:|||.||.||:.|..:::|||||||||:::|
Zfish    71 IPRSLDGRLQVSHRKGLPHVIYCRVWRWPDLQSHHELKALDCCEFPFGSKQKEICINPYHYRRVE 135

  Fly   130 LSILVPKSLPTPPDSIVDYPLDNHTHQIPNNTDYN-----AAIIRSASL--SP--PQYMELGGAG 185
            ..:|.|.                   .:|.::::|     .|..|:|||  .|  ||......:.
Zfish   136 TPVLPPV-------------------LVPRHSEFNPQHSLLAKFRNASLHNEPLMPQNATFPDSF 181

  Fly   186 PVSVSSSASSTPATAAGGGGGPSSSSSSSSSAASAYQQQQQQLSFGQNMDSQSSVLSVGSSIPNT 250
            |....||.||:|           |||.:.|.||.::.            :|.||....||....|
Zfish   182 PAMPCSSFSSSP-----------SSSLNPSPAAHSFP------------NSPSSATEPGSPYQIT 223

  Fly   251 G-TPPPGYM------SEDGDPIDPNDNMNMSRLTPPADAAPVMYHEPAFWCSISYYELNTRVGET 308
            . ||||.|.      |||..|.:.::| .:....|..|..||.|.||.:|||::|||||.|||||
Zfish   224 AETPPPPYSMMESSPSEDVKPAESSEN-KLILTAPQRDLRPVCYEEPEYWCSVAYYELNNRVGET 287

  Fly   309 FHASQPSITVDGFTDPSNSE-RFCLGLLSNVNRNEVVEQTRRHIGKGVRLYYIGGEVFAECLSDS 372
            ||||..||.|||||||||:: |||||||||||||..:|.|||||||||.|||:||||:|||||||
Zfish   288 FHASARSILVDGFTDPSNNKNRFCLGLLSNVNRNSTIEHTRRHIGKGVHLYYVGGEVYAECLSDS 352

  Fly   373 SIFVQSPNCNQRYGWHPATVCKIPPGCNLKIFNNQEFAALLSQSVSQGFEAVYQLTRMCTIRMSF 437
            ||||||.|||.::|:||.||||||.||:|||||||.||.||||||:.|||.||:||:||||||||
Zfish   353 SIFVQSRNCNYQHGFHPTTVCKIPSGCSLKIFNNQLFAQLLSQSVNHGFEVVYELTKMCTIRMSF 417

  Fly   438 VKGWGAEYRRQTVTSTPCWIELHLNGPLQWLDRVLTQMGSPRLPCSSMS 486
            ||||||||.||.|||||||||:||:|||||||:||||||||..|.||:|
Zfish   418 VKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLTQMGSPHNPISSVS 466

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmoxNP_511079.1 MH1_R-SMAD 7..130 CDD:199812 69/123 (56%)
MH2_SMAD_2_3 285..475 CDD:199826 150/190 (79%)
smad9NP_001315428.1 MH1_SMAD_1_5_9 13..136 CDD:199814 71/126 (56%)
MH2_SMAD_1_5_9 266..466 CDD:199822 157/199 (79%)

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