DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smox and Dad

DIOPT Version :9

Sequence 1:NP_001285006.1 Gene:Smox / 31738 FlyBaseID:FBgn0025800 Length:486 Species:Drosophila melanogaster
Sequence 2:NP_001369021.1 Gene:Dad / 42059 FlyBaseID:FBgn0020493 Length:665 Species:Drosophila melanogaster


Alignment Length:473 Identity:116/473 - (24%)
Similarity:182/473 - (38%) Gaps:157/473 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 GKWSEKAVKNLVKKIKK------------------NSQLEELERAISTQNCQTRCVTVPRSKPAP 72
            ||...:..:.|:|::|:                  .:|.:.:|...:|.....:|:.:| .|...
  Fly   214 GKRFREDFEALMKQLKRKQRNELLLAVKSRLDPPTKTQRDVVEPTTTTAPTYLQCILIP-CKTQT 277

  Fly    73 AGEHLRKGLPHVIYCRLWRWPDLQSQNELKPLDHCEYAFHLRKEEI--CINPYHYKKIELSILVP 135
            ..|      |||...||:.|.:|.:..|||.|..|..|    ::.|  |.||.|:.:|   :..|
  Fly   278 VWE------PHVTASRLFFWRELWNAKELKRLPTCPAA----RDCIYMCCNPLHWFRI---LHQP 329

  Fly   136 KS-LPTPP----------DSIVDYPLDNHTHQIPNNTDYNAAIIRSASLSPPQYMELGGAGPVSV 189
            :: .||||          |:  |:..|:.          |.|  :||:|                
  Fly   330 ETESPTPPYQRSKMLRLKDA--DFEEDSQ----------NDA--KSAAL---------------- 364

  Fly   190 SSSASSTPATAAGGGGGPSSSSSSSSSAASAYQQQQQQLSFGQNMDSQSSVLSVGSSIPNTGTPP 254
                              |:.|:.|:|.::.|:                               |
  Fly   365 ------------------STWSAESTSISNIYK-------------------------------P 380

  Fly   255 PGYMSEDGDPIDPNDNMNMSRLTPPADAAPVMYHEPAFWCSISYYELNTRVGETFHASQPSITVD 319
            ..|.|...|..|.|.|..:                   ||.|:|:|:..||||.|||...::.: 
  Fly   381 ALYESVTTDGKDHNINSQV-------------------WCQIAYWEMAHRVGEFFHAKTNAVNI- 425

  Fly   320 GFTD---PSNSERFCLGLLSNVNR--NEVVEQTRRHIGKGVRLYYIGGEVFAECLSDSSIFVQSP 379
             :||   .|..:..||..|:....  :.||.:.|..:|.||.|....|:|:.....:::|||.||
  Fly   426 -YTDGIVASEVDSMCLRDLTPAGNQIHSVVPKARHTVGLGVTLSLENGDVWIYNRGNTTIFVDSP 489

  Fly   380 NCNQRYGWHPATVCKIPPGCNLKIFNNQEFAALLSQSVSQGFEAVYQLTRMCTIRMSFVKGWGAE 444
            ..::...    .|||:.||..||.|.... |.|||.. ..|...:..:... :|::||.||||.:
  Fly   490 TLSENLD----RVCKVMPGYCLKAFETNR-AELLSMR-DHGHHPMGPVDYF-SIKISFGKGWGRD 547

  Fly   445 YRRQTVTSTPCWIELHLN 462
            |:||.:...|||:|:|.:
  Fly   548 YKRQDIMGCPCWLEVHFS 565

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmoxNP_001285006.1 MH1_R-SMAD 7..130 CDD:199812 31/123 (25%)
MH2_SMAD_2_3 285..475 CDD:199826 60/183 (33%)
DadNP_001369021.1 MH1_SMAD_6_7 197..329 CDD:199813 31/128 (24%)
MH2_I-SMAD 400..565 CDD:199821 60/173 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45444270
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3701
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR13703
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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