DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Smox and SMAD5

DIOPT Version :9

Sequence 1:NP_001285006.1 Gene:Smox / 31738 FlyBaseID:FBgn0025800 Length:486 Species:Drosophila melanogaster
Sequence 2:NP_001001419.1 Gene:SMAD5 / 4090 HGNCID:6771 Length:465 Species:Homo sapiens


Alignment Length:527 Identity:269/527 - (51%)
Similarity:325/527 - (61%) Gaps:109/527 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLPFTPQVVKRLLALKKGNEDNSVEGKWSEKAVKNLVKKI-KKNSQLEELERAISTQNCQTRCVT 64
            :..||...|||||..|:|:|    |.||:||||..||||: ||...:||||:|:|:....::|||
Human     7 LFSFTSPAVKRLLGWKQGDE----EEKWAEKAVDALVKKLKKKKGAMEELEKALSSPGQPSKCVT 67

  Fly    65 VPRSKPAPAGEHLRKGLPHVIYCRLWRWPDLQSQNELKPLDHCEYAFHLRKEEICINPYHYKKIE 129
            :|||.........|||||||||||:||||||||.:||||||.||:.|..:::|:||||||||::|
Human    68 IPRSLDGRLQVSHRKGLPHVIYCRVWRWPDLQSHHELKPLDICEFPFGSKQKEVCINPYHYKRVE 132

  Fly   130 LSILVPKSLP-----------------------------TPPDSIVDYPLDNHTHQIPNNTDYNA 165
            ..:|.|..:|                             |.|||.         || ||||.:  
Human   133 SPVLPPVLVPRHNEFNPQHSLLVQFRNLSHNEPHMPQNATFPDSF---------HQ-PNNTPF-- 185

  Fly   166 AIIRSASLSPPQYMELGGAGPVSVSSSASSTPATAAGGGGGPSSSSSSSSSAASAYQQQQQQLSF 230
                                |:|.:|....:||::.      ..:|.:||...|.:|        
Human   186 --------------------PLSPNSPYPPSPASST------YPNSPASSGPGSPFQ-------- 216

  Fly   231 GQNMDSQSSVLSVGSSIPNTGTPPPGYMSED-------GDPIDPNDNMNMSRLTP---PADAAPV 285
                            :| ..||||.||..|       ..|:|.::|| :.::.|   ..|..||
Human   217 ----------------LP-ADTPPPAYMPPDDQMGQDNSQPMDTSNNM-IPQIMPSISSRDVQPV 263

  Fly   286 MYHEPAFWCSISYYELNTRVGETFHASQPSITVDGFTDPSNSE-RFCLGLLSNVNRNEVVEQTRR 349
            .|.||..||||.|||||.||||.||||..|:.|||||||||:: |||||||||||||..:|.|||
Human   264 AYEEPKHWCSIVYYELNNRVGEAFHASSTSVLVDGFTDPSNNKSRFCLGLLSNVNRNSTIENTRR 328

  Fly   350 HIGKGVRLYYIGGEVFAECLSDSSIFVQSPNCNQRYGWHPATVCKIPPGCNLKIFNNQEFAALLS 414
            ||||||.|||:||||:|||||||||||||.|||..:|:||.||||||..|:||||||||||.||:
Human   329 HIGKGVHLYYVGGEVYAECLSDSSIFVQSRNCNFHHGFHPTTVCKIPSSCSLKIFNNQEFAQLLA 393

  Fly   415 QSVSQGFEAVYQLTRMCTIRMSFVKGWGAEYRRQTVTSTPCWIELHLNGPLQWLDRVLTQMGSPR 479
            |||:.||||||:||:||||||||||||||||.||.|||||||||:||:|||||||:||||||||.
Human   394 QSVNHGFEAVYELTKMCTIRMSFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLTQMGSPL 458

  Fly   480 LPCSSMS 486
            .|.||:|
Human   459 NPISSVS 465

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmoxNP_001285006.1 MH1_R-SMAD 7..130 CDD:199812 70/123 (57%)
MH2_SMAD_2_3 285..475 CDD:199826 149/190 (78%)
SMAD5NP_001001419.1 MH1_SMAD_1_5_9 10..133 CDD:199814 72/126 (57%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 163..249 32/149 (21%)
MH2_SMAD_1_5_9 265..465 CDD:199822 156/199 (78%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3701
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D274383at33208
OrthoFinder 1 1.000 - - FOG0000630
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X373
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
65.820

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