DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Smox and SMAD2

DIOPT Version :9

Sequence 1:NP_001285006.1 Gene:Smox / 31738 FlyBaseID:FBgn0025800 Length:486 Species:Drosophila melanogaster
Sequence 2:NP_001003652.1 Gene:SMAD2 / 4087 HGNCID:6768 Length:467 Species:Homo sapiens


Alignment Length:539 Identity:307/539 - (56%)
Similarity:350/539 - (64%) Gaps:128/539 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLPFTPQVVKRLLALKK---------GNEDNSVEGKWSEKAVKNLVKKIKKNSQLEELERAISTQ 56
            :|||||.||||||..||         |.|.|..|.||.|||||:||||:||..:|:|||:||:||
Human     4 ILPFTPPVVKRLLGWKKSAGGSGGAGGGEQNGQEEKWCEKAVKSLVKKLKKTGRLDELEKAITTQ 68

  Fly    57 NCQTRCVTVP------------------------------RSKPAPAGEHLRKGLPHVIYCRLWR 91
            ||.|:|||:|                              ||.........||||||||||||||
Human    69 NCNTKCVTIPSTCSEIWGLSTPNTIDQWDTTGLYSFSEQTRSLDGRLQVSHRKGLPHVIYCRLWR 133

  Fly    92 WPDLQSQNELKPLDHCEYAFHLRKEEICINPYHYKKIELSILVPKSLPTPPDSIVDY-PLDNHTH 155
            ||||.|.:|||.:::|||||:|:|:|:|:|||||:::|..:|.|..:|...:.:.:. |||::||
Human   134 WPDLHSHHELKAIENCEYAFNLKKDEVCVNPYHYQRVETPVLPPVLVPRHTEILTELPPLDDYTH 198

  Fly   156 QIPNNTDYNAAIIRSASLSPPQYMELGGAGPVSVSSSASSTPATAAGGGGGPSSSSSSSSSAASA 220
            .||.||::.|.|       .||                                         |.
Human   199 SIPENTNFPAGI-------EPQ-----------------------------------------SN 215

  Fly   221 YQQQQQQLSFGQNMDSQSSVLSVGSSIPNTGTPPPGYMSEDGDPIDPNDNMNM-----SRLTPPA 280
            |                         ||.  ||||||:||||:..|...|.:|     :.|:|..
Human   216 Y-------------------------IPE--TPPPGYISEDGETSDQQLNQSMDTGSPAELSPTT 253

  Fly   281 --------DAAPVMYHEPAFWCSISYYELNTRVGETFHASQPSITVDGFTDPSNSERFCLGLLSN 337
                    |..||.|.||||||||:|||||.||||||||||||:|||||||||||||||||||||
Human   254 LSPVNHSLDLQPVTYSEPAFWCSIAYYELNQRVGETFHASQPSLTVDGFTDPSNSERFCLGLLSN 318

  Fly   338 VNRNEVVEQTRRHIGKGVRLYYIGGEVFAECLSDSSIFVQSPNCNQRYGWHPATVCKIPPGCNLK 402
            ||||..||.||||||:|||||||||||||||||||:|||||||||||||||||||||||||||||
Human   319 VNRNATVEMTRRHIGRGVRLYYIGGEVFAECLSDSAIFVQSPNCNQRYGWHPATVCKIPPGCNLK 383

  Fly   403 IFNNQEFAALLSQSVSQGFEAVYQLTRMCTIRMSFVKGWGAEYRRQTVTSTPCWIELHLNGPLQW 467
            |||||||||||:|||:|||||||||||||||||||||||||||||||||||||||||||||||||
Human   384 IFNNQEFAALLAQSVNQGFEAVYQLTRMCTIRMSFVKGWGAEYRRQTVTSTPCWIELHLNGPLQW 448

  Fly   468 LDRVLTQMGSPRLPCSSMS 486
            ||:||||||||.:.|||||
Human   449 LDKVLTQMGSPSVRCSSMS 467

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmoxNP_001285006.1 MH1_R-SMAD 7..130 CDD:199812 78/161 (48%)
MH2_SMAD_2_3 285..475 CDD:199826 176/189 (93%)
SMAD2NP_001003652.1 MH1_SMAD_2_3 8..172 CDD:199815 80/163 (49%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 207..251 22/118 (19%)
PY-motif 221..225 3/3 (100%)
MH2_SMAD_2_3 266..456 CDD:199826 176/189 (93%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 348 1.000 Domainoid score I1034
eggNOG 1 0.900 - - E1_KOG3701
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 578 1.000 Inparanoid score I1032
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48607
OrthoDB 1 1.010 - - D274383at33208
OrthoFinder 1 1.000 - - FOG0000630
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_104703
Panther 1 1.100 - - O PTHR13703
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X373
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1110.840

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