DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Smox and smad7

DIOPT Version :9

Sequence 1:NP_001285006.1 Gene:Smox / 31738 FlyBaseID:FBgn0025800 Length:486 Species:Drosophila melanogaster
Sequence 2:NP_778257.2 Gene:smad7 / 326282 ZFINID:ZDB-GENE-030128-3 Length:372 Species:Danio rerio


Alignment Length:443 Identity:118/443 - (26%)
Similarity:178/443 - (40%) Gaps:144/443 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 NLVKKIKKNSQLEELERAISTQ-NCQTRCVTVPRSKPAPAGEHLRKGLPHVIYCRLWRWPDLQSQ 98
            :::||||: .|||.|.:|:.:: ..::.|:.:|....|..|:| ...||.::| :::|||||:..
Zfish    57 SILKKIKE-KQLEVLLQAVESRGGARSPCLLLPGKADARLGQH-SYPLPLLLY-KVFRWPDLRHS 118

  Fly    99 NELKPLDHCEYAFHLRKEEICINPYHYKKIELSILVPKSLPTPPDSIVDYPLDNHTHQIPNNTDY 163
            :|||.|..||....:..|.:|.||:|..::       ..|.:||.....||           ||:
Zfish   119 SELKRLSCCESYGKINPELVCCNPHHMSRL-------CELESPPPPYSRYP-----------TDF 165

  Fly   164 NAAIIRSASLSPPQYMELGGAGPVSVSSSASSTPATAAGGGGGPSSSSSSSSSAASAYQQQQQQL 228
                     |.||              .|..|.||:...||...|:....|.|.|          
Zfish   166 ---------LKPP--------------DSPGSVPASTETGGTAYSAPMGFSDSLA---------- 197

  Fly   229 SFGQNMDSQSSVLSVGSSIPNTGTPPPGYMSEDGDPIDPNDNMNMSRLTPPADAAPVMYHEPAFW 293
                                         :.|.|                          |...|
Zfish   198 -----------------------------LQERG--------------------------EQPHW 207

  Fly   294 CSISYYELNTRVGETFHASQPSITVDGFTDPSNSERFCLGLLSNVNRNEVVEQTRRHIGKGVRLY 358
            |.::|:|..||||..:...:||:  |.|.|......||||.|::.|::::|:..|..||.|::|.
Zfish   208 CVVAYWEEKTRVGRLYSVQEPSL--DIFYDLPQGTGFCLGQLASENKSQLVQMVRAKIGYGIQLS 270

  Fly   359 YIGGEVFAECLSDSSIFVQS---PNCNQRYGWHPATVCKIPPGCNLKIF-----------NNQEF 409
            .....|:....|...||::|   .|.:.|    ...|.|:.||.::|.|           |:.||
Zfish   271 READGVWVYNRSCYPIFIKSATLDNPDSR----TLLVHKVFPGFSIKAFDFEKAGSLQRPNDHEF 331

  Fly   410 AALLSQSVSQGFEAVYQLTRMCTIRMSFVKGWGAEYRRQTVTSTPCWIELHLN 462
                ||....||          |:::|||||||..|.||.::|.|||:|:..|
Zfish   332 ----SQQPRTGF----------TVQISFVKGWGQCYTRQFISSCPCWLEVIFN 370

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmoxNP_001285006.1 MH1_R-SMAD 7..130 CDD:199812 33/95 (35%)
MH2_SMAD_2_3 285..475 CDD:199826 63/192 (33%)
smad7NP_778257.2 MH1_SMAD_7 36..152 CDD:199818 33/104 (32%)
MH2_SMAD_7 200..370 CDD:199825 64/215 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3701
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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