DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Smox and Smad5

DIOPT Version :9

Sequence 1:NP_001285006.1 Gene:Smox / 31738 FlyBaseID:FBgn0025800 Length:486 Species:Drosophila melanogaster
Sequence 2:NP_001157513.1 Gene:Smad5 / 17129 MGIID:1328787 Length:465 Species:Mus musculus


Alignment Length:506 Identity:268/506 - (52%)
Similarity:330/506 - (65%) Gaps:67/506 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLPFTPQVVKRLLALKKGNEDNSVEGKWSEKAVKNLVKKI-KKNSQLEELERAISTQNCQTRCVT 64
            :..||...|||||..|:|:|    |.||:||||..||||: ||...:||||:|:|:....::|||
Mouse     7 LFSFTSPAVKRLLGWKQGDE----EEKWAEKAVDALVKKLKKKKGAMEELEKALSSPGQPSKCVT 67

  Fly    65 VPRSKPAPAGEHLRKGLPHVIYCRLWRWPDLQSQNELKPLDHCEYAFHLRKEEICINPYHYKKIE 129
            :|||.........|||||||||||:||||||||.:||||||.||:.|..:::|:||||||||::|
Mouse    68 IPRSLDGRLQVSHRKGLPHVIYCRVWRWPDLQSHHELKPLDICEFPFGSKQKEVCINPYHYKRVE 132

  Fly   130 LSILVPKSLP-----TPPDS-IVDY-PLDNHTHQIPNNTDYNAAIIRSASLSPPQYMELGGAG-P 186
            ..:|.|..:|     .|..| :|.: .|.::...:|.|..:           |..:.:...|. |
Mouse   133 SPVLPPVLVPRHNEFNPQHSLLVQFRNLSHNEPHMPQNATF-----------PDSFHQPNNAPFP 186

  Fly   187 VSVSSSASSTPATAAGGGGGPSSSSSSSSSAASAYQQQQQQLSFGQNMDSQSSVLSVGSSIPNTG 251
            :|.:|....:||::.      ..:|.:||...|.:|                        :| ..
Mouse   187 LSPNSPYPPSPASST------YPNSPASSGPGSPFQ------------------------LP-AD 220

  Fly   252 TPPPGYMSEDGDPIDPNDNM------NMSRLTPPA----DAAPVMYHEPAFWCSISYYELNTRVG 306
            ||||.||..| |.:.|:::.      ||...|.|:    |..||.|.||..||||.|||||.|||
Mouse   221 TPPPAYMPPD-DQMAPDNSQPMDTSSNMIPQTMPSISSRDVQPVAYEEPKHWCSIVYYELNNRVG 284

  Fly   307 ETFHASQPSITVDGFTDPSNSE-RFCLGLLSNVNRNEVVEQTRRHIGKGVRLYYIGGEVFAECLS 370
            |.||||..|:.|||||||||:: |||||||||||||..:|.|||||||||.|||:||||:|||||
Mouse   285 EAFHASSTSVLVDGFTDPSNNKSRFCLGLLSNVNRNSTIENTRRHIGKGVHLYYVGGEVYAECLS 349

  Fly   371 DSSIFVQSPNCNQRYGWHPATVCKIPPGCNLKIFNNQEFAALLSQSVSQGFEAVYQLTRMCTIRM 435
            ||||||||.|||..:|:||.||||||..|:||||||||||.||:|||:.||||||:||:||||||
Mouse   350 DSSIFVQSRNCNFHHGFHPTTVCKIPSSCSLKIFNNQEFAQLLAQSVNHGFEAVYELTKMCTIRM 414

  Fly   436 SFVKGWGAEYRRQTVTSTPCWIELHLNGPLQWLDRVLTQMGSPRLPCSSMS 486
            ||||||||||.||.|||||||||:||:|||||||:||||||||..|.||:|
Mouse   415 SFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLTQMGSPLNPISSVS 465

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmoxNP_001285006.1 MH1_R-SMAD 7..130 CDD:199812 70/123 (57%)
MH2_SMAD_2_3 285..475 CDD:199826 149/190 (78%)
Smad5NP_001157513.1 MH1_SMAD_1_5_9 10..133 CDD:199814 72/126 (57%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 163..251 26/130 (20%)
MH2_SMAD_1_5_9 265..465 CDD:199822 156/199 (78%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3701
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D274383at33208
OrthoFinder 1 1.000 - - FOG0000630
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X373
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.820

Return to query results.
Submit another query.