DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smox and smad6

DIOPT Version :10

Sequence 1:NP_511079.1 Gene:Smox / 31738 FlyBaseID:FBgn0025800 Length:486 Species:Drosophila melanogaster
Sequence 2:XP_004912726.1 Gene:smad6 / 100038072 XenbaseID:XB-GENE-481307 Length:357 Species:Xenopus tropicalis


Alignment Length:436 Identity:123/436 - (28%)
Similarity:175/436 - (40%) Gaps:128/436 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 AVKNLVKKIKKNSQLEELERAISTQNCQTRCVTVPRSKPAPAGEHLRKGLPHVIYCRLWRWPDLQ 96
            |...::|::|:.:....||...|.......||.|.|..|.          ||::.|||:|||:||
 Frog    42 AASAILKRLKEQALCALLEAVESRGAAPGGCVCVTRHGPP----------PHLLLCRLFRWPELQ 96

  Fly    97 SQNELKPLDHCEYAFHLRKEEICINPYHYKKIELSILVPKSLPTPPDS-----IVDYPLDNHTHQ 156
            ...:||.|..|:.|.......:|.|||||.:    :..|:| |.||.|     |...|||     
 Frog    97 HPGQLKALCGCQGAGGSENNSVCCNPYHYSR----VCGPES-PPPPYSRLSPKIEQKPLD----- 151

  Fly   157 IPNNTDYNAAIIRSASLSPPQYMELGGAGPVSVSSSASSTPATAAGGGGGPSSSSSSSSSAASAY 221
                            || ..|.|:          .||::....||...|.|:|::|.|      
 Frog   152 ----------------LS-DSYTEM----------EASNSLCITAGDISGTSASNTSLS------ 183

  Fly   222 QQQQQQLSFGQNMDSQSSVLSVGSSIPNTGTPPPGYMSEDGDPIDPNDNMNMSRLTPPADAAPVM 286
                                      |:        ||:.|                        
 Frog   184 --------------------------PD--------MSKQG------------------------ 190

  Fly   287 YHEPAFWCSISYYELNTRVGETFHASQPSITVDGFTDPSNSERFCLGLLSNVNRNEVVEQTRRHI 351
                 .|||::|:|..||||..:...|||:::  |.|......||||.|:..||:|...:||..|
 Frog   191 -----HWCSVAYWEHRTRVGRLYAVCQPSVSI--FYDLPQGSGFCLGQLNLENRSEAAARTRGKI 248

  Fly   352 GKGVRLYYIGGEVFAECLSDSSIFVQSPNCNQRYGWHPATVCKIPPGCNLKIFNNQEFAALLSQ- 415
            |.|:.|......|:|...||..|||.||..:.. ...|..|.|:.||.:||:|:.::...|... 
 Frog   249 GLGIVLSREADGVWAYNRSDHPIFVNSPTLDAP-ACRPLVVRKVMPGYSLKVFDYKKSCVLRHHP 312

  Fly   416 SVSQGFEAVYQLTRMCTIRMSFVKGWGAEYRRQTVTSTPCWIELHL 461
            :..:..:..|.   ..::|:||.||||..|.||.:||.|||:|:.|
 Frog   313 TPPEHTDGPYD---PHSVRISFAKGWGPCYSRQMITSCPCWLEVLL 355

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmoxNP_511079.1 MH1_R-SMAD 7..130 CDD:199812 32/97 (33%)
MH2_SMAD_2_3 285..475 CDD:199826 64/178 (36%)
smad6XP_004912726.1 MH1_SMAD_6 27..132 CDD:199817 32/103 (31%)
MH2_SMAD_6 183..357 CDD:199824 69/248 (28%)

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