DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG2120 and ZNF28

DIOPT Version :9

Sequence 1:NP_572446.2 Gene:CG2120 / 31737 FlyBaseID:FBgn0030005 Length:315 Species:Drosophila melanogaster
Sequence 2:NP_008900.3 Gene:ZNF28 / 7576 HGNCID:13073 Length:718 Species:Homo sapiens


Alignment Length:257 Identity:89/257 - (34%)
Similarity:127/257 - (49%) Gaps:35/257 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 ALQQRNTTEHKP--TDMCKP--KRTPTTKRHR---TTGKDHTCDICDRRFSEAYN--LRIHKMTH 121
            |..:|..|..||  .:.|:.  .|....:||:   |..|.:.|.:||:.|  |||  |..|.:.|
Human   371 ARHRRLHTGEKPYECEECEKVFSRKSHLERHKRIHTGEKPYKCKVCDKAF--AYNSYLAKHSIIH 433

  Fly   122 TDEKPHVCVECGKGFRQLNKLRIHAVTHTAERPHKCDICGKGFRYANYLTVHRRLHTGEKPYPCL 186
            |.|||:.|.||||.|.|.:.|..|...||||:|:||:.|.|.||..::|..|||:|||||||.|.
Human   434 TGEKPYKCNECGKVFNQQSTLARHHRLHTAEKPYKCEECDKVFRCKSHLERHRRIHTGEKPYKCK 498

  Fly   187 ATDCHLSFHSIHARRIHTKLRHAAQTDPDPEHPLAEQEQRDTSALSFTCPVCSRVLTDQCYLSIH 251
            .  |..:|.|                    :..|.|.::..|....:.|..|.:|.:.:..|:.|
Human   499 V--CDKAFRS--------------------DSCLTEHQRVHTGEKPYMCNECGKVFSTKANLACH 541

  Fly   252 LKRHYNQRDFPCPQPECGKRFFSASELKHHQIAHTQQRPFACPLCPARFLRKSNHKQHLKVH 313
            .|.|..::.:.|  .||.|.|...|.::.|:..||.::|:.|.:|...|.|.|:..||.:||
Human   542 HKLHTAEKPYKC--EECEKVFSRKSHMERHRRIHTGEKPYKCKVCDKAFRRDSHLAQHQRVH 601

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2120NP_572446.2 C2H2 Zn finger 101..121 CDD:275368 9/21 (43%)
zf-H2C2_2 113..138 CDD:290200 14/26 (54%)
C2H2 Zn finger 129..149 CDD:275368 9/19 (47%)
zf-H2C2_2 142..166 CDD:290200 12/23 (52%)
COG5048 151..>264 CDD:227381 34/112 (30%)
C2H2 Zn finger 157..177 CDD:275368 9/19 (47%)
C2H2 Zn finger 185..206 CDD:275368 4/20 (20%)
C2H2 Zn finger 235..255 CDD:275368 6/19 (32%)
C2H2 Zn finger 263..285 CDD:275368 7/21 (33%)
C2H2 Zn finger 293..313 CDD:275368 7/19 (37%)
ZNF28NP_008900.3 KRAB 8..>48 CDD:214630
KRAB 8..47 CDD:279668
COG5048 <143..373 CDD:227381 1/1 (100%)
C2H2 Zn finger 217..237 CDD:275368
C2H2 Zn finger 245..265 CDD:275368
COG5048 267..655 CDD:227381 89/257 (35%)
C2H2 Zn finger 273..293 CDD:275368
C2H2 Zn finger 301..321 CDD:275368
C2H2 Zn finger 329..349 CDD:275368
zf-H2C2_2 341..366 CDD:290200
C2H2 Zn finger 357..377 CDD:275368 2/5 (40%)
zf-H2C2_2 370..394 CDD:290200 6/22 (27%)
C2H2 Zn finger 385..405 CDD:275368 4/19 (21%)
zf-H2C2_2 397..422 CDD:290200 8/26 (31%)
C2H2 Zn finger 413..433 CDD:275368 9/21 (43%)
zf-H2C2_2 425..450 CDD:290200 13/24 (54%)
C2H2 Zn finger 441..461 CDD:275368 9/19 (47%)
C2H2 Zn finger 469..489 CDD:275368 9/19 (47%)
zf-H2C2_2 481..506 CDD:290200 14/26 (54%)
C2H2 Zn finger 497..517 CDD:275368 6/41 (15%)
zf-H2C2_2 510..534 CDD:290200 6/23 (26%)
C2H2 Zn finger 525..545 CDD:275368 6/19 (32%)
C2H2 Zn finger 553..573 CDD:275368 7/21 (33%)
zf-H2C2_2 565..590 CDD:290200 7/24 (29%)
C2H2 Zn finger 581..601 CDD:275368 7/19 (37%)
zf-H2C2_2 593..618 CDD:290200 4/9 (44%)
C2H2 Zn finger 609..629 CDD:275368
zf-H2C2_2 621..646 CDD:290200
C2H2 Zn finger 637..657 CDD:275368
C2H2 Zn finger 665..685 CDD:275368
zf-H2C2_2 677..702 CDD:290200
C2H2 Zn finger 693..713 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
11.000

Return to query results.
Submit another query.