DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2120 and Sry-beta

DIOPT Version :10

Sequence 1:NP_572446.2 Gene:CG2120 / 31737 FlyBaseID:FBgn0030005 Length:315 Species:Drosophila melanogaster
Sequence 2:NP_524579.1 Gene:Sry-beta / 43570 FlyBaseID:FBgn0003511 Length:356 Species:Drosophila melanogaster


Alignment Length:259 Identity:61/259 - (23%)
Similarity:92/259 - (35%) Gaps:62/259 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 TDMCKPKRTPTTKRHRTTGKDHTC------DICDRRF------------SEAYNLRIHKMTHTDE 124
            |.:.:|:|.|        |::..|      ::.|..|            .|.:      .|.|.|
  Fly   120 TALKEPERQP--------GEEDECEEFMKEEMLDEEFQFSEPDDSMPSSEEEF------FTETTE 170

  Fly   125 KPHVCVECGKGFRQLNKLRIHAVTHTAERPHK--CDICGKGFRYANYLTVHRRLHTGEKPYPCLA 187
            .|  |..||:.|.....|..|....|.::..:  |::||...:....|.:|..||.|:....|..
  Fly   171 IP--CHICGEMFSSQEVLERHIKADTCQKSEQATCNVCGLKVKDDEVLDLHMNLHEGKTELECRY 233

  Fly   188 TDCHLSFHSIHARRIHTKLRHAAQTDPDPEHPLAEQEQRDTSALSFTCPVCSRVLTDQCYLSIHL 252
            .|...|    |.|.:   ||| .:...|.:              .:.|..|....:....:..||
  Fly   234 CDKKFS----HKRNV---LRH-MEVHWDKK--------------KYQCDKCGERFSLSWLMYNHL 276

  Fly   253 KRH-YNQRDFPCPQPECGKRFFSASELKHHQIAHTQQRP-FACPLCPARFLRKSNHKQHLKVHE 314
            .|| ..:....|  ..|.::|.:....|||...|...|| :.||.|...|:.|...|.|.:||:
  Fly   277 MRHDAEENALIC--EVCHQQFKTKRTYKHHLRTHQTDRPRYPCPDCEKSFVDKYTLKVHKRVHQ 338

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2120NP_572446.2 C2H2 Zn finger 101..121 CDD:275368 4/37 (11%)
C2H2 Zn finger 129..149 CDD:275368 6/19 (32%)
COG5048 151..>264 CDD:227381 23/115 (20%)
C2H2 Zn finger 157..177 CDD:275368 5/19 (26%)
C2H2 Zn finger 185..206 CDD:275368 5/20 (25%)
C2H2 Zn finger 235..255 CDD:275368 4/19 (21%)
C2H2 Zn finger 263..285 CDD:275368 6/21 (29%)
C2H2 Zn finger 293..313 CDD:275368 7/19 (37%)
Sry-betaNP_524579.1 C2H2 Zn finger 203..223 CDD:275368 5/19 (26%)
C2H2 Zn finger 231..251 CDD:275368 8/27 (30%)
C2H2 Zn finger 259..308 CDD:275368 12/50 (24%)
C2H2 Zn finger 288..303 CDD:275370 3/16 (19%)
zf-C2H2 315..337 CDD:395048 7/21 (33%)
C2H2 Zn finger 317..337 CDD:275368 7/19 (37%)

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