DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2120 and Rslcan18

DIOPT Version :9

Sequence 1:NP_572446.2 Gene:CG2120 / 31737 FlyBaseID:FBgn0030005 Length:315 Species:Drosophila melanogaster
Sequence 2:NP_001242981.1 Gene:Rslcan18 / 432770 MGIID:5433745 Length:460 Species:Mus musculus


Alignment Length:328 Identity:108/328 - (32%)
Similarity:148/328 - (45%) Gaps:58/328 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 CLE----DLQLFAQLEDLS-------GERLPMEMELLNPGSEYDLLELVNGALQQRNTTEHKPTD 79
            |||    ||.....||:.|       ....|:.:..|....     ||.|...:.......|...
Mouse   112 CLEPAQWDLYRDVMLENFSHLVFLGFSFSKPLLVRFLEKNQ-----ELRNVKRKAATVPRGKKPY 171

  Fly    80 MCK------PKRTPTTK--RHRTTGKDHTCDICDRRFSEAYNLRIHKMTHTDEKPHVCVECGKGF 136
            .||      .|.:..|:  |..|..|.:||||||:.||....|..|:..||.|||:.|..|||.|
Mouse   172 KCKECGKAFAKSSVLTQHLRIHTGEKPYTCDICDKAFSLPSILHNHQKIHTGEKPYKCEVCGKAF 236

  Fly   137 RQLNKLRIHAVTHTAERPHKCDICGKGFRYANYLTVHRRLHTGEKPYPCLATDCHLSFHS----I 197
            ...:.|..|...||.|:|:||::|||.|...:.||.|:::|||||||.|..  |...|.|    .
Mouse   237 LMPSTLTNHQKIHTGEKPYKCEVCGKAFLMPSTLTNHQKIHTGEKPYECEV--CGKKFSSPADFT 299

  Fly   198 HARRIHTKLRHAAQTDPDPEHPLAEQEQR----DTSALS-----------FTCPVCSRVLTDQCY 247
            ..:|:||           .|.|...:|.:    :.||||           :||..|.:..:...:
Mouse   300 KHQRVHT-----------GEKPYKCEECKKPFSNLSALSRHKVVHTGEKRYTCEKCGKAYSRSYH 353

  Fly   248 LSIHLKRHYNQRDFPCPQPECGKRFFSASELKHHQIAHTQQRPFACPLCPARFLRKSNHKQHLKV 312
            ||.|.|.|..|:.:.|  .||||.|:.:|:||.||..|:::||:.|..|...|...|:..||.:.
Mouse   354 LSRHKKAHSGQKSYKC--KECGKMFYYSSDLKRHQRIHSEERPYECEECGKAFPSPSDVTQHART 416

  Fly   313 HER 315
            |:|
Mouse   417 HKR 419

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2120NP_572446.2 C2H2 Zn finger 101..121 CDD:275368 9/19 (47%)
zf-H2C2_2 113..138 CDD:290200 12/24 (50%)
C2H2 Zn finger 129..149 CDD:275368 7/19 (37%)
zf-H2C2_2 142..166 CDD:290200 12/23 (52%)
COG5048 151..>264 CDD:227381 41/131 (31%)
C2H2 Zn finger 157..177 CDD:275368 8/19 (42%)
C2H2 Zn finger 185..206 CDD:275368 7/24 (29%)
C2H2 Zn finger 235..255 CDD:275368 6/19 (32%)
C2H2 Zn finger 263..285 CDD:275368 11/21 (52%)
C2H2 Zn finger 293..313 CDD:275368 6/19 (32%)
Rslcan18NP_001242981.1 KRAB 96..154 CDD:214630 10/46 (22%)
KRAB 96..135 CDD:279668 8/22 (36%)
COG5048 168..458 CDD:227381 95/267 (36%)
C2H2 Zn finger 173..193 CDD:275368 5/19 (26%)
zf-H2C2_2 186..209 CDD:290200 10/22 (45%)
C2H2 Zn finger 201..221 CDD:275368 9/19 (47%)
zf-H2C2_2 216..236 CDD:290200 10/19 (53%)
C2H2 Zn finger 229..249 CDD:275368 7/19 (37%)
zf-H2C2_2 242..264 CDD:290200 11/21 (52%)
C2H2 Zn finger 257..277 CDD:275368 8/19 (42%)
zf-H2C2_2 270..294 CDD:290200 13/25 (52%)
C2H2 Zn finger 285..305 CDD:275368 5/21 (24%)
zf-H2C2_2 297..322 CDD:290200 6/35 (17%)
C2H2 Zn finger 313..333 CDD:275368 5/19 (26%)
zf-H2C2_2 325..350 CDD:290200 6/24 (25%)
C2H2 Zn finger 341..361 CDD:275368 6/19 (32%)
zf-H2C2_2 353..378 CDD:290200 12/26 (46%)
zf-C2H2 367..389 CDD:278523 11/23 (48%)
C2H2 Zn finger 369..389 CDD:275368 11/21 (52%)
zf-H2C2_2 381..404 CDD:290200 9/22 (41%)
C2H2 Zn finger 397..417 CDD:275368 6/19 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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