DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2120 and L

DIOPT Version :10

Sequence 1:NP_572446.2 Gene:CG2120 / 31737 FlyBaseID:FBgn0030005 Length:315 Species:Drosophila melanogaster
Sequence 2:NP_001188929.1 Gene:L / 36609 FlyBaseID:FBgn0288433 Length:1366 Species:Drosophila melanogaster


Alignment Length:256 Identity:69/256 - (26%)
Similarity:96/256 - (37%) Gaps:50/256 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 HRTTGKDHTCDICDRRFSEAYNLRIHKMTHTD-EKPHVCVECGKGFRQLNKLRIHAVTH---TAE 152
            |.:||| |.|.|||..|.....|..||:.|:. .:...|..||:....:...|.|...|   .|.
  Fly  1041 HNSTGK-HKCLICDEVFPSPAILAEHKLQHSKVGQSGKCSHCGQPLEDVAAFRAHLSEHGSDGAS 1104

  Fly   153 RPHKCDICGKGFRYANYLTVHRRLHT------GEKPYP----CL-----ATD---------CHLS 193
            .|..|..|.:.......|::|.:.||      |....|    ||     ||:         |.. 
  Fly  1105 LPLACICCRQTLHSEFELSLHAKFHTKSSSSGGSLQEPVCALCLEPLPDATEGPAKLCDKCCRK- 1168

  Fly   194 FHSIHARRIHTKLRHAAQTDPDPEHPLAEQEQRDTSALSFTCPVCSRVLTDQCYLSIHLKRH--- 255
             |:::.:|    .:|:......|..|.|..|.|        |.:|..:|.....|..||..|   
  Fly  1169 -HNLNGKR----GKHSEPATSLPAPPSAFVENR--------CNLCKMILPHAQKLQEHLVEHTFA 1220

  Fly   256 -YNQRDFPCPQPECGKRFFSASELKHHQIAH-TQQRPFACPLCPARFLRKSNHKQHLKVHE 314
             ..||.|.|  ..|...|.:...|.:|...| ...||:.|.|||.:|..::..:.|.:.||
  Fly  1221 GTEQRGFNC--YICSAVFTAPGGLLNHMGEHGAHSRPYDCNLCPEKFFFRAELEHHQRGHE 1279

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2120NP_572446.2 C2H2 Zn finger 101..121 CDD:275368 8/19 (42%)
C2H2 Zn finger 129..149 CDD:275368 5/19 (26%)
COG5048 151..>264 CDD:227381 33/140 (24%)
C2H2 Zn finger 157..177 CDD:275368 4/19 (21%)
C2H2 Zn finger 185..206 CDD:275368 7/34 (21%)
C2H2 Zn finger 235..255 CDD:275368 6/19 (32%)
C2H2 Zn finger 263..285 CDD:275368 5/21 (24%)
C2H2 Zn finger 293..313 CDD:275368 6/19 (32%)
LNP_001188929.1 C2H2 Zn finger 294..314 CDD:275368
C2H2 Zn finger 322..342 CDD:275368
COG5048 336..769 CDD:227381
C2H2 Zn finger 350..370 CDD:275368
C2H2 Zn finger 378..398 CDD:275368
C2H2 Zn finger 630..650 CDD:275368
C2H2 Zn finger 659..679 CDD:275368
C2H2 Zn finger 689..707 CDD:275368
C2H2 Zn finger 1020..1041 CDD:275368 69/256 (27%)
C2H2 Zn finger 1049..1069 CDD:275368 8/19 (42%)
C2H2 Zn finger 1197..1217 CDD:275368 6/19 (32%)
C2H2 Zn finger 1229..1246 CDD:275368 4/18 (22%)
C2H2 Zn finger 1258..1278 CDD:275368 6/19 (32%)
Blue background indicates that the domain is not in the aligned region.

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