DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2120 and let-391

DIOPT Version :10

Sequence 1:NP_572446.2 Gene:CG2120 / 31737 FlyBaseID:FBgn0030005 Length:315 Species:Drosophila melanogaster
Sequence 2:NP_491744.3 Gene:let-391 / 182953 WormBaseID:WBGene00006492 Length:453 Species:Caenorhabditis elegans


Alignment Length:297 Identity:75/297 - (25%)
Similarity:103/297 - (34%) Gaps:88/297 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   100 TCDICDRRFSEAYNLRIHKMTHTDEKPHVCVECGKGFRQLNKLRIH-AVTHTAERPHKCDI-CGK 162
            ||::|.........:..|..|||.|||:.|..||..|.|...:..| .|.|..:.|..|:. |||
 Worm    58 TCEVCGVALKYPSRIMEHMRTHTGEKPYECDICGMRFTQRTPMINHFRVQHMGDLPFLCNFGCGK 122

  Fly   163 GFRYANYLTVHRRLHTGEK------PY-------PCLATDCHLSFHSIHARRIH-TKLRHAAQTD 213
            .|...:..|.|...|.|.|      ||       .|.:.|..:..:|..|..|. ..:....|:|
 Worm   123 RFVNNSRRTAHELSHNGLKRAGPARPYLKPVKKIVCPSMDMDILSNSALANYISPPTIDSIFQSD 187

  Fly   214 P-----------------------------------------------------DPEHPLAEQE- 224
            |                                                     |.|.|:.|.| 
 Worm   188 PSTSSSSPSQFQSSNQTTKQSIYPSEKEMEKAAISNARIDDVINTVLARVLAPIDEEIPIEEPEK 252

  Fly   225 ----------QRDTSALSFTCPVCSRVLTDQCYLSIHLKRHYNQRDFPCPQPECGKRFFSASELK 279
                      :|.|.|   .|.:|..:|.....::.|::.|..::.|.|  .|||.....||.||
 Worm   253 APQKRAYISNRRATLA---QCNICGLMLKHPSKIADHIRTHTGEKPFEC--GECGLSLSKASSLK 312

  Fly   280 -HHQIAHTQQRPFACP-LCPARFLRKSNHKQH-LKVH 313
             |.:..||.:|||.|. .|...|:..|..|:| :.||
 Worm   313 VHIRRMHTGERPFECTWRCGLSFVTDSVRKEHEMTVH 349

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2120NP_572446.2 C2H2 Zn finger 101..121 CDD:275368 3/19 (16%)
C2H2 Zn finger 129..149 CDD:275368 7/20 (35%)
COG5048 151..>264 CDD:227381 35/191 (18%)
C2H2 Zn finger 157..177 CDD:275368 7/20 (35%)
C2H2 Zn finger 185..206 CDD:275368 5/21 (24%)
C2H2 Zn finger 235..255 CDD:275368 4/19 (21%)
C2H2 Zn finger 263..285 CDD:275368 9/22 (41%)
C2H2 Zn finger 293..313 CDD:275368 6/21 (29%)
let-391NP_491744.3 C2H2 Zn finger 357..377 CDD:275368
C2H2 Zn finger 59..79 CDD:275368 3/19 (16%)
zf-H2C2_2 73..96 CDD:463886 11/22 (50%)
C2H2 Zn finger 87..108 CDD:275368 7/20 (35%)
C2H2 Zn finger 116..137 CDD:275368 7/20 (35%)
C2H2 Zn finger 270..290 CDD:275368 4/19 (21%)
zf-H2C2_2 286..>302 CDD:463886 5/17 (29%)
C2H2 Zn finger 298..319 CDD:275368 9/22 (41%)
C2H2 Zn finger 327..347 CDD:275368 6/19 (32%)
Blue background indicates that the domain is not in the aligned region.

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