DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2120 and yy1

DIOPT Version :10

Sequence 1:NP_572446.2 Gene:CG2120 / 31737 FlyBaseID:FBgn0030005 Length:315 Species:Drosophila melanogaster
Sequence 2:NP_001116880.1 Gene:yy1 / 100126440 XenbaseID:XB-GENE-961263 Length:372 Species:Xenopus tropicalis


Alignment Length:182 Identity:55/182 - (30%)
Similarity:78/182 - (42%) Gaps:35/182 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 EDLSGERLPMEMELLNPGS--EYDLLELVNGALQQRNTTEHKPTDMC-----KPKRTPTTKRHRT 94
            |.::|::||       ||.  ..||.:               |..:.     ||::.......||
 Frog   211 EYMTGKKLP-------PGGIPGIDLSD---------------PKQLAEFARMKPRKIKEDDAPRT 253

  Fly    95 TGKDHTCDICDRRFSEAYNLRIHKMTHTDEKPHVCVECGKGFRQLNKLRIHAVTHTAERPHKCDI 159
            ....|..  |.:.|.:...:|.|..|| ..:.|||.||||.|.:.:||:.|.:.||.|:|.:|..
 Frog   254 IACPHKG--CTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTF 315

  Fly   160 --CGKGFRYANYLTVHRRLHTGEKPYPCLATDCHLSFHSIHARRIHTKLRHA 209
              |||.|.....|..|.|:|||::||.|....|:..|......:.|. |.||
 Frog   316 EGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHI-LTHA 366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2120NP_572446.2 C2H2 Zn finger 101..121 CDD:275368 4/19 (21%)
C2H2 Zn finger 129..149 CDD:275368 9/19 (47%)
COG5048 151..>264 CDD:227381 22/61 (36%)
C2H2 Zn finger 157..177 CDD:275368 8/21 (38%)
C2H2 Zn finger 185..206 CDD:275368 4/20 (20%)
C2H2 Zn finger 235..255 CDD:275368
C2H2 Zn finger 263..285 CDD:275368
C2H2 Zn finger 293..313 CDD:275368
yy1NP_001116880.1 COG5048 <226..365 CDD:227381 47/157 (30%)
C2H2 Zn finger 256..278 CDD:275368 5/23 (22%)
C2H2 Zn finger 285..305 CDD:275368 9/19 (47%)
C2H2 Zn finger 313..335 CDD:275368 8/21 (38%)
C2H2 Zn finger 343..365 CDD:275368 5/22 (23%)
Blue background indicates that the domain is not in the aligned region.

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