DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2116 and CG4854

DIOPT Version :9

Sequence 1:NP_572444.2 Gene:CG2116 / 31735 FlyBaseID:FBgn0030003 Length:598 Species:Drosophila melanogaster
Sequence 2:NP_650860.1 Gene:CG4854 / 42391 FlyBaseID:FBgn0038766 Length:319 Species:Drosophila melanogaster


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2116NP_572444.2 C2H2 Zn finger 256..275 CDD:275368
C2H2 Zn finger 285..305 CDD:275368
PHA00733 <308..357 CDD:177301
C2H2 Zn finger 313..334 CDD:275368
C2H2 Zn finger 341..362 CDD:275368
C2H2 Zn finger 370..388 CDD:275368
C2H2 Zn finger 400..418 CDD:275370
C2H2 Zn finger 429..447 CDD:275368
CG4854NP_650860.1 zf-AD 12..>57 CDD:285071
C2H2 Zn finger 180..200 CDD:275368
zf-H2C2_2 193..217 CDD:290200
COG5048 201..>258 CDD:227381
C2H2 Zn finger 208..228 CDD:275368
zf-H2C2_2 221..244 CDD:290200
C2H2 Zn finger 236..256 CDD:275368
zf-H2C2_2 251..273 CDD:290200
C2H2 Zn finger 264..284 CDD:275368
zf-H2C2_2 277..301 CDD:290200
C2H2 Zn finger 292..312 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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