DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2116 and CG11247

DIOPT Version :9

Sequence 1:NP_572444.2 Gene:CG2116 / 31735 FlyBaseID:FBgn0030003 Length:598 Species:Drosophila melanogaster
Sequence 2:NP_001097659.1 Gene:CG11247 / 40414 FlyBaseID:FBgn0037120 Length:522 Species:Drosophila melanogaster


Alignment Length:398 Identity:93/398 - (23%)
Similarity:145/398 - (36%) Gaps:126/398 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   143 EEDLDMYPPSSPSLPPSPP--RPPSPVVQPASKARNSARQIALRSFVSQKNND-------DDDGS 198
            |:.:.:...|..|| .|||  |..||....|.|.|.|:......:.|.::.:|       |||..
  Fly    11 EDAVSLLTDSGISL-SSPPAARESSPGPTLAIKRRKSSLASLRDACVDEEEDDGGEQDSKDDDYV 74

  Fly   199 VKEVKPSEKMLE--------------EFKGP---RRYMLFDDLIATIVDFDEDSTPLVEFSMISD 246
            ..::|.|.:..|              ||.|.   :|:||                          
  Fly    75 QPQLKKSARKGEPVKRKHHVCSQCSKEFGGKTDLQRHML-------------------------- 113

  Fly   247 IMDEKLPVECGICPDVMHKSKLSKHHKTHLVPGTNRYACIYCTETYRDCKYLAGHARRHMGIRPY 311
            |..::.|.:|..|.....::...|:|.|.......::.|..|.:::...:.|..|.|.|.|.:||
  Fly   114 IHSDERPHKCKDCGKSYRQAVNLKNHITTAHEHRKQFVCSQCPKSFALKERLRLHMRLHSGEKPY 178

  Fly   312 VCEL------------------------------CTLYFSTKQDLRVHNQRRHLEKEHICEVCGK 346
            .|:|                              |:..|||..:||||.:|.....||.|.:|..
  Fly   179 PCDLCDKKFARGGQLQQHMVSHHKTSIQQFNCTKCSASFSTNANLRVHMERHEQGMEHRCSICEN 243

  Fly   347 TFAQNTQLKRHREATHEKKRRFQCEYCQKAYYKNFSLQEHIR----------------------- 388
            .||....|:.|....|.|..:|:||.|.|....:..|..|::                       
  Fly   244 QFANELALRAHINQEHHKLTQFECEICHKMIEPDEDLATHMQRHTAVKTHVCEVCNTYFTQKSQY 308

  Fly   389 NVHM----GKRRMLKCPFCGMQCRDAHKMARHRK--EMHLSQGT----YVCHLCQEE--FTDISY 441
            ||||    |:|     |:   |||..|:...|..  ::|:.:.|    :.|.||::|  |:.:::
  Fly   309 NVHMRMHTGER-----PY---QCRICHQTFAHSSVLKLHIRKHTGEKPFRCQLCEDEVAFSQLAH 365

  Fly   442 FDAHKRSI 449
            ...|.:.|
  Fly   366 LKNHMKKI 373

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2116NP_572444.2 C2H2 Zn finger 256..275 CDD:275368 4/18 (22%)
C2H2 Zn finger 285..305 CDD:275368 5/19 (26%)
PHA00733 <308..357 CDD:177301 20/78 (26%)
C2H2 Zn finger 313..334 CDD:275368 11/50 (22%)
C2H2 Zn finger 341..362 CDD:275368 6/20 (30%)
C2H2 Zn finger 370..388 CDD:275368 6/17 (35%)
C2H2 Zn finger 400..418 CDD:275370 6/17 (35%)
C2H2 Zn finger 429..447 CDD:275368 6/19 (32%)
CG11247NP_001097659.1 COG5048 <88..247 CDD:227381 38/184 (21%)
C2H2 Zn finger 95..115 CDD:275368 6/45 (13%)
zf-H2C2_2 107..132 CDD:290200 7/50 (14%)
C2H2 Zn finger 123..144 CDD:275368 5/20 (25%)
C2H2 Zn finger 152..172 CDD:275368 5/19 (26%)
zf-H2C2_2 165..189 CDD:290200 9/23 (39%)
C2H2 Zn finger 180..200 CDD:275368 2/19 (11%)
COG5048 <192..369 CDD:227381 45/184 (24%)
C2H2 Zn finger 210..230 CDD:275370 8/19 (42%)
C2H2 Zn finger 238..260 CDD:275371 6/21 (29%)
C2H2 Zn finger 267..287 CDD:275368 6/19 (32%)
C2H2 Zn finger 295..315 CDD:275368 4/19 (21%)
zf-H2C2_2 309..332 CDD:290200 11/30 (37%)
C2H2 Zn finger 323..343 CDD:275368 5/19 (26%)
C2H2 Zn finger 351..374 CDD:275368 7/23 (30%)
C2H2 Zn finger 382..399 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45446683
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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