DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2116 and CG17612

DIOPT Version :9

Sequence 1:NP_572444.2 Gene:CG2116 / 31735 FlyBaseID:FBgn0030003 Length:598 Species:Drosophila melanogaster
Sequence 2:NP_608824.1 Gene:CG17612 / 33639 FlyBaseID:FBgn0031597 Length:618 Species:Drosophila melanogaster


Alignment Length:558 Identity:126/558 - (22%)
Similarity:211/558 - (37%) Gaps:138/558 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 EDNRGNVRVINTSDD-ATYVLLDNLGNEFEEDIIIVNENGVEKEMLMSKELRDFIVGSRVKDLTD 88
            |::|.|..||...|. |..|:|::  :....|:||:.::..|:|:.:.||  :.|.|       :
  Fly   113 ENHRANNDVILIQDSFAEEVILED--HPANNDVIIIQDSVAEEELPVIKE--EAIEG-------E 166

  Fly    89 DEQMPQFVVRE-LDMSEVGDLVEVEPEMEQEADYGDYGDYEHEPSYGHPRDNERVEEDLDMYPPS 152
            |.|...|::.| |:...:|   .....:||..:..:..|..|:  ||.|     :...|..|   
  Fly   167 DLQGEYFIITECLEEPAIG---SCRVCLEQSDNLTNIFDDAHQ--YGIP-----IATILSQY--- 218

  Fly   153 SPSLPPSPPRPPSPVVQPASKARNSARQIALRSFVSQKNNDDDDGSVKEV-----KPSEKMLE-- 210
                          ...|..|..:.:..|.:......||..||..|.:..     :|.|::::  
  Fly   219 --------------TGMPVEKGDSFSEYICVTCLDVVKNAFDDLESKENTIQMYRQPKEEIIDID 269

  Fly   211 -----------EFKG---------PRRYMLFDDLIATIVDFDEDST---PLVEFSM--------- 243
                       |..|         |:.::|...|.|.|...:|..|   |.::..|         
  Fly   270 SIPVKNKPVDYEVTGKPPHRCPQCPKIFLLAAKLQAHIRTHNETRTTEPPRLKCPMCPSIYMKRG 334

  Fly   244 ----------ISDIMDEKL--PVECGICPDV-MHKSKLSKHHKTH-----LVPGTNRYACIYCTE 290
                      .||..:.:|  |..|..||.: ::.|.|..|.:||     .:...:.:.|..|.:
  Fly   335 CLEAHMWIHRASDERESELEPPYRCPHCPKLFLYSSFLEIHIQTHEDVSQRLSRKSSHKCAQCAD 399

  Fly   291 TYRDCKYLAGHARRHMGIRPYVCELCTLYFSTKQDLRVHNQRRHLEKEHICEVCGKTFAQNTQLK 355
            .:.|...|..|.:.|.|.|.:.|.||.:.|..:.:|:.|:......|   |..|.|.|.....|.
  Fly   400 VFSDVSSLKDHVKIHAGERTFKCPLCLMSFQEESNLKSHDCAHTRFK---CHKCSKFFESQNYLD 461

  Fly   356 RHREATHEKKRRFQCEYCQKAYYKNFSLQEHI---------RNVHMGKRRMLKCPFC--GMQCRD 409
            .|.:.:|..|..|:|..||:.:.|...|:|||         |:...|  ::..||.|  .....|
  Fly   462 FHFKKSHTTKGPFKCIKCQQTFQKRNGLKEHISSQVCVQFLRSKSPG--QIFPCPKCPKKFSIED 524

  Fly   410 AHKM--ARHRK-----EMHLSQGTYVCHLCQEEFTD----ISYFDAHKRSIQC-RSNTRRFVNAD 462
            .::|  |.|:|     |.|      .|..|::.:.:    ..:..:|.|.:.| .|.|.:::.. 
  Fly   525 NYQMHHATHKKVKTVIERH------NCTQCKKSYQNKKLLTKHILSHNRCVHCSMSFTSKYLLE- 582

  Fly   463 GNREGSDSESISG-RNMNGQDDDYDGMGPLQEEYDEDD 499
             ....|.|..::| |.....:.:|:..    ||.:|.|
  Fly   583 -QHTCSQSYQLNGSRGRKNPNLNYNEC----EESNESD 615

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2116NP_572444.2 C2H2 Zn finger 256..275 CDD:275368 6/19 (32%)
C2H2 Zn finger 285..305 CDD:275368 5/19 (26%)
PHA00733 <308..357 CDD:177301 13/48 (27%)
C2H2 Zn finger 313..334 CDD:275368 6/20 (30%)
C2H2 Zn finger 341..362 CDD:275368 6/20 (30%)
C2H2 Zn finger 370..388 CDD:275368 8/26 (31%)
C2H2 Zn finger 400..418 CDD:275370 7/21 (33%)
C2H2 Zn finger 429..447 CDD:275368 3/21 (14%)
CG17612NP_608824.1 zf-AD 187..>246 CDD:285071 14/82 (17%)
C2H2 Zn finger 290..310 CDD:275368 5/19 (26%)
C2H2 Zn finger 323..343 CDD:275370 1/19 (5%)
zf-C2H2_8 356..438 CDD:292531 22/81 (27%)
C2H2 Zn finger 359..379 CDD:275368 6/19 (32%)
C2H2 Zn finger 394..414 CDD:275368 5/19 (26%)
C2H2 Zn finger 422..438 CDD:275368 5/15 (33%)
C2H2 Zn finger 447..463 CDD:275368 5/15 (33%)
C2H2 Zn finger 476..505 CDD:275368 9/28 (32%)
C2H2 Zn finger 513..533 CDD:275368 6/19 (32%)
C2H2 Zn finger 545..565 CDD:275368 2/19 (11%)
C2H2 Zn finger 568..584 CDD:275368 3/17 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45449785
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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