DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG2116 and LOC105947706

DIOPT Version :9

Sequence 1:NP_572444.2 Gene:CG2116 / 31735 FlyBaseID:FBgn0030003 Length:598 Species:Drosophila melanogaster
Sequence 2:XP_004915597.2 Gene:LOC105947706 / 105947706 -ID:- Length:515 Species:Xenopus tropicalis


Alignment Length:445 Identity:117/445 - (26%)
Similarity:173/445 - (38%) Gaps:107/445 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 GSRVKDLTDDEQMPQFVVRELD-MSEVGDLVEVEPEM------EQEADYGDYGDY---------E 128
            |...|:.|        :..|.| :|...|:...|||:      |:|.|..|. ||         :
 Frog    44 GEETKETT--------IKAEKDPLSNADDIPGGEPEILRINIKEEEPDPEDV-DYMGSTAATCSD 99

  Fly   129 HEPSYGHPRDNE-RVEEDLDM----------YPPSSPSLP---------PSPPRPPSPVVQPASK 173
            |: |.|.|...: :.||||::          |....|.|.         |...||.|||:..|..
 Frog   100 HD-STGEPDLIQIKAEEDLELDGYCTSAEVTYNDREPCLTIEGKPISELPDWLRPQSPVLPEADT 163

  Fly   174 ARNSARQIA--LRSFVSQKNNDDDDGSVKEVKPSEKMLEEFKGPRRYMLFDDLIATIVDF----- 231
            ...:..|:.  .|.|       .|:.|.|:.|..|.:    .|||        |:.:..:     
 Frog   164 CPYTLPQVTDPFRRF-------QDNISAKQCKHGEGL----SGPR--------ISGVCAYTRKKS 209

  Fly   232 --DEDST-----PLVEFSMISDIMDEKL--PVECGICPDVMHKSKLSKHHKTHLVPGTNRYACIY 287
              ..:||     |.:..|.......:||  ..|||  .....:|.|..|.:.|  .|...:.|..
 Frog   210 LTTNESTRGCFQPTLLISHKRLCAQKKLFNCTECG--KGFPQRSLLLTHQRVH--TGEKPFTCKD 270

  Fly   288 CTETYRDCKYLAGHARRHMGIRPYVCELCTLYFSTKQDLRVHNQRRHLEKEHICEVCGKTFAQNT 352
            |.:.:....:|..|||.|.|.:|:.|..|...||.|..|..|.:....||..:|..|||.|||.:
 Frog   271 CGKCFSQKNHLLSHARVHTGEKPFTCTECGKPFSQKSHLLSHKKVHTGEKSFVCAECGKNFAQKS 335

  Fly   353 QLKRHREATHEKKRRFQCEYCQKAYYKNFSLQEHIRNVHMGKRRMLKCPFCGMQCRDAHK----M 413
            .|.|| |..|..::.|.|..|.|.:.:..||..|.:: |.|.:     ||..|:|.:...    :
 Frog   336 HLLRH-ERVHTGEKPFTCPDCGKRFCQKMSLLSHHKS-HTGDK-----PFTCMECGERFSLNSTL 393

  Fly   414 ARHRKEMHLSQGTYVCHLCQEEFTDISYFDAHKR---------SIQC-RSNTRRF 458
            .:||| :|:...:|.|..|.:.|.......:|:|         ..:| :|.:|:|
 Frog   394 NKHRK-LHVGVKSYTCSECGKSFFQKFNLLSHERIHTGEKPFTCTKCGKSFSRKF 447

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2116NP_572444.2 C2H2 Zn finger 256..275 CDD:275368 5/18 (28%)
C2H2 Zn finger 285..305 CDD:275368 6/19 (32%)
PHA00733 <308..357 CDD:177301 18/48 (38%)
C2H2 Zn finger 313..334 CDD:275368 7/20 (35%)
C2H2 Zn finger 341..362 CDD:275368 11/20 (55%)
C2H2 Zn finger 370..388 CDD:275368 6/17 (35%)
C2H2 Zn finger 400..418 CDD:275370 5/21 (24%)
C2H2 Zn finger 429..447 CDD:275368 4/17 (24%)
LOC105947706XP_004915597.2 C2H2 Zn finger 240..260 CDD:275368 6/21 (29%)
zf-H2C2_2 253..277 CDD:404364 6/25 (24%)
C2H2 Zn finger 268..288 CDD:275368 6/19 (32%)
COG5048 <276..464 CDD:227381 55/180 (31%)
C2H2 Zn finger 296..316 CDD:275368 7/19 (37%)
C2H2 Zn finger 324..344 CDD:275368 11/20 (55%)
C2H2 Zn finger 352..372 CDD:275368 6/20 (30%)
C2H2 Zn finger 380..400 CDD:275368 5/20 (25%)
C2H2 Zn finger 408..428 CDD:275368 5/19 (26%)
C2H2 Zn finger 436..456 CDD:275368 4/12 (33%)
C2H2 Zn finger 464..484 CDD:275368
C2H2 Zn finger 492..512 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.